myRT

myRT report for GCA_002934895.1_ASM293489v1

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Seq: CP026399.1 Escherichia coli strain ECONIH4 chromosome, complete genome (5277702 bp)
Overview 1 RT 1: 537222-540838 bp 2 RT 2: 2062720-2065946 bp 3 RT 3: 2146332-2151807 bp 4 RT 4: 2685582-2688677 bp 5 RT 5: 3511990-3516417 bp 6 RT 6: 4677713-4680829 bp Neighborhood of RT #1 [537222, 541223] PHA02517 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [2062720, 2065946] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #3 [2146332, 2151806] scrB_fam fruct_sucro_rep RVT-GII GIIM PHA02517 Neighborhood of RT #4 [2685582, 2689092] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #5 [3511990, 3516449] InsE RVT-GII GIIM PHA02517 TnsD Neighborhood of RT #6 [4677713, 4681244] PHA02517 RVT-GII GIIM InsE Feature: gene Location: 537222-537704 bp Feature: domain Description: PHA02517 Location: 537312-537702 bp Feature: domain Description: PHA0251 7 Location: 53731 2-537702 bp Feature: gene Location: 537743-538216 bp Feature: domain Description: PHA02517 Location: 537749-538214 bp Feature: domain Description: PHA0251 7 Location: 537749-53821 4 bp Feature: gene Location: 538306-539829 bp Ori: AUY00860.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538579-539311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538579-53931 1 bp Feature: domain Description: GIIM Note: maturase Location: 539386-539584 bp Feature: domain Description: GIIM Note: maturase Location: 539386-539584 bp Feature: gene Location: 540123-540494 bp Feature: gene Location: 540487-541223 bp Feature: domain Description: InsE Location: 540499-540838 bp Feature: domain Description: InsE Location: 540499-540838 bp Feature: gene Location: 2062720-2063145 bp Feature: domain Description: PHA02517 Location: 2062810-2063146 bp Feature: domain Description: PHA0251 7 Location: 206281 0-20631 46 bp Feature: gene Location: 2063072-2063509 bp Feature: gene Location: 2063803-2065326 bp Ori: AUY02295.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2064076-2064808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2064076-2064808 bp Feature: domain Description: GIIM Note: maturase Location: 2064883-2065081 bp Feature: domain Description: GIIM Note: maturase Location: 2064883-2065081 bp Feature: gene Location: 2065407-2065586 bp Feature: domain Description: PHA02517 Location: 2065410-2065587 bp Feature: domain Description: PHA0251 7 Location: 206541 0-2065587 bp Feature: gene Location: 2065734-2065946 bp Feature: gene Location: 2146332-2147732 bp Ori: AUY02395.1 Feature: domain Description: scrB_fam Location: 2146377-2147649 bp Feature: domain Description: scrB_fam Location: 21 46377-21 47649 bp Feature: gene Location: 2147762-2148766 bp Ori: AUY02396.1 Feature: domain Description: fruct_sucro_rep Location: 2147783-2148761 bp Feature: domain Description: fruct_sucro_rep Location: 21 47783-21 48761 bp Feature: gene Location: 2149200-2150723 bp Ori: AUY02397.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2149473-2150205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 49473-21 50205 bp Feature: domain Description: GIIM Note: maturase Location: 2150280-2150478 bp Feature: domain Description: GIIM Note: maturase Location: 21 50280-21 50478 bp Feature: gene Location: 2151017-2151448 bp Feature: gene Location: 2151381-2151806 bp Feature: domain Description: PHA02517 Location: 2151471-2151807 bp Feature: domain Description: PHA0251 7 Location: 21 51 471 -21 51 807 bp Feature: gene Location: 2685582-2685794 bp Feature: gene Location: 2685942-2686121 bp Feature: domain Description: PHA02517 Location: 2685945-2686122 bp Feature: domain Description: PHA0251 7 Location: 2685945-26861 22 bp Feature: gene Location: 2686202-2687725 bp Ori: AUY02871.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2686475-2687207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2686475-2687207 bp Feature: domain Description: GIIM Note: maturase Location: 2687282-2687480 bp Feature: domain Description: GIIM Note: maturase Location: 2687282-2687480 bp Feature: gene Location: 2688019-2688390 bp Feature: gene Location: 2688383-2689092 bp Feature: domain Description: InsE Location: 2688410-2688677 bp Feature: domain Description: InsE Location: 268841 0-2688677 bp Feature: gene Location: 3511990-3512726 bp Feature: domain Description: InsE Location: 3512002-3512341 bp Feature: domain Description: InsE Location: 351 2002-351 2341 bp Feature: gene Location: 3512719-3513090 bp Feature: gene Location: 3513384-3514907 bp Ori: AUY03598.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3513657-3514389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351 3657-351 4389 bp Feature: domain Description: GIIM Note: maturase Location: 3514464-3514662 bp Feature: domain Description: GIIM Note: maturase Location: 351 4464-351 4662 bp Feature: gene Location: 3514997-3515470 bp Feature: domain Description: PHA02517 Location: 3515003-3515468 bp Feature: domain Description: PHA0251 7 Location: 351 5003-351 5468 bp Feature: gene Location: 3515514-3516449 bp Feature: domain Description: TnsD Location: 3515946-3516417 bp Feature: domain Description: TnsD Location: 351 5946-351 641 7 bp Feature: gene Location: 4677713-4677784 bp Feature: gene Location: 4677812-4678273 bp Feature: domain Description: PHA02517 Location: 4677815-4678265 bp Feature: domain Description: PHA0251 7 Location: 467781 5-4678265 bp Feature: gene Location: 4678354-4679877 bp Ori: AUY04695.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4678627-4679359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4678627-4679359 bp Feature: domain Description: GIIM Note: maturase Location: 4679434-4679632 bp Feature: domain Description: GIIM Note: maturase Location: 4679434-4679632 bp Feature: gene Location: 4680171-4680542 bp Feature: gene Location: 4680535-4681244 bp Feature: domain Description: InsE Location: 4680562-4680829 bp Feature: domain Description: InsE Location: 4680562-4680829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), scrB_fam (TIGR01322), fruct_sucro_rep (TIGR02417), TnsD (pfam15978)