myRT

myRT report for GCA_002935085.1_ASM293508v1

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Seq: CP026397.1 Klebsiella pneumoniae strain KPNIH48 plasmid pKPN-10f7, complete sequence (220406 bp)
Overview 1 RT 1: 101040-105242 bp Neighborhood of RT #1 [101040, 105259] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 101040-101711 bp Ori: AUY23078.1 Feature: domain Description: Plasmid_stab_B Location: 101055-101262 bp Feature: domain Description: Plasmid_stab_B Location: 1 01 055-1 01 262 bp Feature: domain Description: Plasmid_stab_B Location: 101367-101574 bp Feature: domain Description: Plasmid_stab_B Location: 1 01 367-1 01 574 bp Feature: gene Location: 101714-102685 bp Ori: AUY23079.1 Feature: domain Description: StbA Location: 101717-102662 bp Feature: domain Description: StbA Location: 1 01 71 7-1 02662 bp Feature: gene Location: 102934-104418 bp Ori: AUY23080.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103336-104026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 03336-1 04026 bp Feature: gene Location: 104418-104669 bp Feature: gene Location: 104828-105259 bp Ori: AUY23082.1 Feature: domain Description: PRK10276 Location: 104879-105242 bp Feature: domain Description: PRK1 0276 Location: 1 04879-1 05242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP026398.1 Klebsiella pneumoniae strain KPNIH48 plasmid pKPN-edaa, complete sequence (249238 bp)
Overview 1 RT 1: 31532-35290 bp 2 RT 2: 129022-132861 bp Neighborhood of RT #1 [31532, 35290] RVT-GII Neighborhood of RT #2 [129022, 132881] INT_Cre_C RVT-GII HHA Feature: gene Location: 31532-31825 bp Feature: gene Location: 31842-32423 bp Feature: gene Location: 32497-33981 bp Ori: AUY23237.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32899-33589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 899-33589 bp Feature: gene Location: 33981-34232 bp Feature: gene Location: 34811-35290 bp Feature: gene Location: 129022-129339 bp Feature: gene Location: 129405-130541 bp Ori: AUY23325.1 Feature: domain Description: INT_Cre_C Location: 129828-130482 bp Feature: domain Description: INT_Cre_C Location: 12 982 8-130482 bp Feature: gene Location: 130627-132111 bp Ori: AUY23326.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131029-131719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13102 9-131719 bp Feature: gene Location: 132111-132362 bp Feature: gene Location: 132627-132881 bp Ori: AUY23328.1 Feature: domain Description: HHA Location: 132678-132861 bp Feature: domain Description: HHA Location: 132 678-132 861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, INT_Cre_C (cd00799), HHA (pfam05321)

Seq: CP026392.1 Klebsiella pneumoniae strain KPNIH48 chromosome, complete genome (5531975 bp)
Overview 1 RT 1: 699727-703754 bp 2 RT 2: 820327-823595 bp 3 RT 3: 4306514-4309469 bp 4 RT 4: 4794295-4799166 bp Neighborhood of RT #1 [699727, 703768] umuC PRK10276 RVT-GII HTH_Hin_like Neighborhood of RT #2 [820327, 823606] PRK05451 RVT-GII PRK10597 Neighborhood of RT #3 [4306514, 4309469] HTH_Hin_like RVT-GII Neighborhood of RT #4 [4794295, 4799180] dacD RVT-GII PRK10016 YccC Feature: gene Location: 699727-700992 bp Ori: AUY17979.1 Feature: domain Description: umuC Location: 699730-700990 bp Feature: domain Description: umuC Location: 69973 0-700990 bp Feature: gene Location: 700995-701414 bp Ori: AUY17980.1 Feature: domain Description: PRK10276 Location: 700998-701409 bp Feature: domain Description: PRK10276 Location: 700998-701409 bp Feature: gene Location: 701493-702977 bp Ori: AUY17981.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 701895-702585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 701895-702585 bp Feature: gene Location: 702977-703228 bp Feature: gene Location: 703586-703768 bp Ori: AUY17983.1 Feature: domain Description: HTH_Hin_like Location: 703634-703754 bp Feature: domain Description: HTH_Hin_like Location: 703 63 4-703 754 bp Feature: gene Location: 820327-821373 bp Ori: AUY18102.1 Feature: domain Description: PRK05451 Location: 820342-821368 bp Feature: domain Description: PRK05451 Location: 8203 42-8213 68 bp Feature: gene Location: 821399-821473 bp Feature: gene Location: 821466-822950 bp Ori: AUY18103.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 821868-822558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 821868-822558 bp Feature: gene Location: 822950-823201 bp Feature: gene Location: 823355-823606 bp Ori: AUY18105.1 Feature: domain Description: PRK10597 Location: 823358-823595 bp Feature: domain Description: PRK10597 Location: 823 3 58-823 595 bp Feature: gene Location: 4306514-4306894 bp Feature: gene Location: 4307007-4307210 bp Feature: domain Description: HTH_Hin_like Location: 4307064-4307181 bp Feature: domain Description: HTH_Hin_like Location: 43 07064-43 07181 bp Feature: gene Location: 4307342-4308826 bp Ori: AUY21305.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4307744-4308434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 07744-43 0843 4 bp Feature: gene Location: 4308826-4309077 bp Feature: gene Location: 4309230-4309469 bp Feature: gene Location: 4794295-4795464 bp Ori: AUY21708.1 Feature: domain Description: dacD Location: 4794304-4795459 bp Feature: domain Description: dacD Location: 47943 04-4795459 bp Feature: gene Location: 4795733-4795984 bp Feature: gene Location: 4795984-4797468 bp Ori: AUY21710.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4796386-4797076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47963 86-4797076 bp Feature: gene Location: 4797550-4798023 bp Ori: AUY21711.1 Feature: domain Description: PRK10016 Location: 4797553-4798012 bp Feature: domain Description: PRK10016 Location: 4797553 -4798012 bp Feature: gene Location: 4798122-4799180 bp Ori: AUY21712.1 Feature: domain Description: YccC Location: 4798128-4799166 bp Feature: domain Description: YccC Location: 4798128-4799166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, HTH_Hin_like (cd00569), PRK05451 (dihydroorotase; Provisional), PRK10597 (DNA damage-inducible protein I; Provisional), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)