myRT

myRT report for GCA_002935105.1_ASM293510v1

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Seq: CP026387.1 Leclercia sp. LSNIH3 chromosome, complete genome (4781217 bp)
Overview 1 RT 1: 214902-218047 bp 2 RT 2: 414333-417631 bp 3 RT 3: 1488177-1491272 bp 4 RT 4: 1895262-1898533 bp 5 RT 5: 2366446-2370153 bp 6 RT 6: 3845920-3849719 bp Neighborhood of RT #1 [214902, 218441] PRK15005 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [414333, 418025] HTH_23 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #3 [1488177, 1491666] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #4 [1895262, 1898927] PRK13605 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #5 [2366446, 2370155] RVT-GII TisB_tox Neighborhood of RT #6 [3845920, 3850257] InsE RVT-GII GIIM PHA02517 InsE Feature: gene Location: 214902-214985 bp Feature: domain Description: PRK15005 Location: 214905-214986 bp Feature: domain Description: PRK1 5005 Location: 21 4905-21 4986 bp Feature: gene Location: 215003-215491 bp Feature: domain Description: PHA02517 Location: 215006-215480 bp Feature: domain Description: PHA0251 7 Location: 21 5006-21 5480 bp Feature: gene Location: 215572-217095 bp Ori: AUY37472.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 215845-216577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 5845-21 6577 bp Feature: domain Description: GIIM Note: maturase Location: 216652-216850 bp Feature: domain Description: GIIM Note: maturase Location: 21 6652-21 6850 bp Feature: gene Location: 217389-217826 bp Feature: gene Location: 217753-218441 bp Feature: domain Description: InsE Location: 217762-218047 bp Feature: domain Description: InsE Location: 21 7762-21 8047 bp Feature: gene Location: 414333-414542 bp Ori: AUY37646.1 Feature: domain Description: HTH_23 Location: 414414-414504 bp Feature: domain Description: HTH_23 Location: 41 441 4-41 4504 bp Feature: gene Location: 414587-415075 bp Feature: domain Description: PHA02517 Location: 414590-415064 bp Feature: domain Description: PHA0251 7 Location: 41 4590-41 5064 bp Feature: gene Location: 415156-416679 bp Ori: AUY37647.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 415429-416161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 5429-41 61 61 bp Feature: domain Description: GIIM Note: maturase Location: 416236-416434 bp Feature: domain Description: GIIM Note: maturase Location: 41 6236-41 6434 bp Feature: gene Location: 416973-417410 bp Feature: gene Location: 417337-418025 bp Feature: domain Description: InsE Location: 417346-417631 bp Feature: domain Description: InsE Location: 41 7346-41 7631 bp Feature: gene Location: 1488177-1488389 bp Feature: gene Location: 1488537-1488716 bp Feature: domain Description: PHA02517 Location: 1488540-1488717 bp Feature: domain Description: PHA0251 7 Location: 1 488540-1 48871 7 bp Feature: gene Location: 1488797-1490320 bp Ori: AUY38594.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1489070-1489802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 489070-1 489802 bp Feature: domain Description: GIIM Note: maturase Location: 1489877-1490075 bp Feature: domain Description: GIIM Note: maturase Location: 1 489877-1 490075 bp Feature: gene Location: 1490614-1491051 bp Feature: gene Location: 1490978-1491666 bp Feature: domain Description: InsE Location: 1490987-1491272 bp Feature: domain Description: InsE Location: 1 490987-1 491 272 bp Feature: gene Location: 1895262-1895483 bp Ori: AUY38936.1 Feature: domain Description: PRK13605 Location: 1895265-1895481 bp Feature: domain Description: PRK1 3605 Location: 1 895265-1 895481 bp Feature: gene Location: 1895489-1895977 bp Feature: domain Description: PHA02517 Location: 1895492-1895957 bp Feature: domain Description: PHA0251 7 Location: 1 895492-1 895957 bp Feature: gene Location: 1896058-1897581 bp Ori: AUY38937.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1896331-1897063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 896331 -1 897063 bp Feature: domain Description: GIIM Note: maturase Location: 1897138-1897336 bp Feature: domain Description: GIIM Note: maturase Location: 1 8971 38-1 897336 bp Feature: gene Location: 1897875-1898312 bp Feature: gene Location: 1898239-1898927 bp Feature: domain Description: InsE Location: 1898248-1898533 bp Feature: domain Description: InsE Location: 1 898248-1 898533 bp Feature: gene Location: 2366446-2366628 bp Feature: gene Location: 2366621-2367334 bp Feature: gene Location: 2367994-2369478 bp Ori: AUY39354.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2368396-2369086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2368396-2369086 bp Feature: gene Location: 2369478-2369729 bp Feature: gene Location: 2370066-2370155 bp Ori: AUY39356.1 Gene: tisB Feature: domain Description: TisB_tox Location: 2370069-2370153 bp Feature: domain Description: TisB_tox Location: 2370069-23701 53 bp Feature: gene Location: 3845920-3846608 bp Feature: domain Description: InsE Location: 3845929-3846214 bp Feature: domain Description: InsE Location: 3845929-384621 4 bp Feature: gene Location: 3846535-3846972 bp Feature: gene Location: 3847266-3848789 bp Ori: AUY40637.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3847539-3848271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3847539-3848271 bp Feature: domain Description: GIIM Note: maturase Location: 3848346-3848544 bp Feature: domain Description: GIIM Note: maturase Location: 3848346-3848544 bp Feature: gene Location: 3848870-3849358 bp Feature: domain Description: PHA02517 Location: 3848873-3849338 bp Feature: domain Description: PHA0251 7 Location: 3848873-3849338 bp Feature: gene Location: 3849449-3850257 bp Feature: domain Description: InsE Location: 3849461-3849719 bp Feature: domain Description: InsE Location: 3849461 -384971 9 bp Sorry, your browser does 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Associated domains:myRT PRK15005 (universal stress protein UspF), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), HTH_23 (pfam13384), PRK13605 (endoribonuclease SymE; Provisional), TisB_tox (TIGR04459)

Seq: CP026390.1 Leclercia sp. LSNIH3 plasmid pLEC-5e18, complete sequence (195394 bp)
Overview 1 RT 1: 50706-54238 bp 2 RT 2: 101245-104742 bp Neighborhood of RT #1 [50706, 54632] PHA02517 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [101245, 105151] PRK10947 PHA02517 RVT-GII GIIM InsE Feature: gene Location: 50706-51188 bp Feature: domain Description: PHA02517 Location: 50709-51180 bp Feature: domain Description: PHA02 517 Location: 50709-51180 bp Feature: gene Location: 51194-51682 bp Feature: domain Description: PHA02517 Location: 51197-51671 bp Feature: domain Description: PHA02 517 Location: 51197-51671 bp Feature: gene Location: 51763-53286 bp Ori: AUY41766.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52036-52768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 036-52 768 bp Feature: domain Description: GIIM Note: maturase Location: 52843-53041 bp Feature: domain Description: GIIM Note: maturase Location: 52 843-53041 bp Feature: gene Location: 53580-54017 bp Feature: gene Location: 53944-54632 bp Feature: domain Description: InsE Location: 53953-54238 bp Feature: domain Description: InsE Location: 53953-542 38 bp Feature: gene Location: 101245-101649 bp Ori: AUY41801.1 Feature: domain Description: PRK10947 Location: 101248-101644 bp Feature: domain Description: PRK10947 Location: 1012 48-101644 bp Feature: gene Location: 101728-102204 bp Feature: domain Description: PHA02517 Location: 101731-102196 bp Feature: domain Description: PHA02 517 Location: 101731-102 196 bp Feature: gene Location: 102285-103808 bp Ori: AUY41802.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102558-103290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 558-1032 90 bp Feature: domain Description: GIIM Note: maturase Location: 103365-103563 bp Feature: domain Description: GIIM Note: maturase Location: 103365-103563 bp Feature: gene Location: 104102-104473 bp Feature: gene Location: 104466-105151 bp Feature: domain Description: InsE Location: 104481-104742 bp Feature: domain Description: InsE Location: 104481-104742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), PRK10947 (DNA-binding transcriptional regulator H-NS)

Seq: CP026391.1 Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence (330021 bp)
Overview 1 RT 1: 279204-283344 bp Neighborhood of RT #1 [279204, 283753] quinone_pig3 PHA02517 RVT-GII GIIM InsE Feature: gene Location: 279204-280184 bp Ori: AUY42224.1 Feature: domain Description: quinone_pig3 Location: 279207-280179 bp Feature: domain Description: quinone_pig3 Location: 279207-280179 bp Feature: gene Location: 280330-280806 bp Feature: domain Description: PHA02517 Location: 280333-280798 bp Feature: domain Description: PHA02517 Location: 2803 3 3 -280798 bp Feature: gene Location: 280887-282410 bp Ori: AUY42151.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281160-281892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281160-281892 bp Feature: domain Description: GIIM Note: maturase Location: 281967-282165 bp Feature: domain Description: GIIM Note: maturase Location: 281967-282165 bp Feature: gene Location: 282704-283075 bp Feature: gene Location: 283068-283753 bp Feature: domain Description: InsE Location: 283080-283344 bp Feature: domain Description: InsE Location: 283 080-283 3 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT quinone_pig3 (TIGR02824), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)