myRT

myRT report for GCA_002946515.2_ASM294651v2

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Seq: CP026613.2 Clostridioides difficile strain R1 chromosome, complete genome (4093143 bp)
Overview 1 RT 1: 2050048-2056150 bp Neighborhood of RT #1 [2050048, 2056212] TraG-D_C Maff2 RVT-GII HNHc MFS PRK13858 Feature: gene Location: 2050048-2050878 bp Feature: domain Description: TraG-D_C Location: 2050309-2050663 bp Feature: domain Description: TraG-D_C Location: 2050309-2050663 bp Feature: gene Location: 2051120-2051251 bp Ori: AVD41756.1 Feature: domain Description: Maff2 Location: 2051123-2051249 bp Feature: domain Description: Maff2 Location: 2051 1 23-2051 249 bp Feature: gene Location: 2051971-2053857 bp Ori: AVD41757.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2052304-2053042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2052304-2053042 bp Feature: domain Description: HNHc Note: nucleases Location: 2053588-2053741 bp Feature: domain Description: HNHc Note: nucleases Location: 2053588-2053741 bp Feature: gene Location: 2054173-2055393 bp Ori: AVD41758.1 Gene: tet(40) Feature: domain Description: MFS Location: 2054215-2055364 bp Feature: domain Description: MFS Location: 205421 5-2055364 bp Feature: gene Location: 2055814-2056212 bp Ori: AVD41759.1 Gene: mobC Feature: domain Description: PRK13858 Location: 2055850-2056150 bp Feature: domain Description: PRK1 3858 Location: 2055850-20561 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Maff2 (pfam12750), RVT-GII, HNHc (smart00507), MFS (cl28910), PRK13858 (T-DNA border endonuclease VirD1)