myRT

myRT report for GCA_002946535.2_ASM294653v2

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Seq: CP026615.2 Clostridioides difficile strain R3 chromosome, complete genome (4093147 bp)
Overview 1 RT 1: 2038629-2044578 bp Neighborhood of RT #1 [2038629, 2044793] PRK13858 MFS RVT-GII HNHc Maff2 TraG-D_C Feature: gene Location: 2038629-2039027 bp Ori: AVD34909.1 Gene: mobC Feature: domain Description: PRK13858 Location: 2038665-2038965 bp Feature: domain Description: PRK1 3858 Location: 2038665-2038965 bp Feature: gene Location: 2039448-2040668 bp Ori: AVD34910.1 Gene: tet(40) Feature: domain Description: MFS Location: 2039490-2040639 bp Feature: domain Description: MFS Location: 2039490-2040639 bp Feature: gene Location: 2040984-2042870 bp Ori: AVD34911.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2041317-2042055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2041 31 7-2042055 bp Feature: domain Description: HNHc Note: nucleases Location: 2042601-2042754 bp Feature: domain Description: HNHc Note: nucleases Location: 2042601 -2042754 bp Feature: gene Location: 2043590-2043721 bp Ori: AVD34912.1 Feature: domain Description: Maff2 Location: 2043593-2043719 bp Feature: domain Description: Maff2 Location: 2043593-204371 9 bp Feature: gene Location: 2043963-2044793 bp Feature: domain Description: TraG-D_C Location: 2044224-2044578 bp Feature: domain Description: TraG-D_C Location: 2044224-2044578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13858 (T-DNA border endonuclease VirD1), MFS (cl28910), RVT-GII, HNHc (smart00507), Maff2 (pfam12750), TraG-D_C (pfam12696)