myRT

myRT report for GCA_002946555.2_ASM294655v2

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Seq: CP026614.2 Clostridioides difficile strain R2 chromosome, complete genome (4093145 bp)
Overview 1 RT 1: 2050051-2056153 bp Neighborhood of RT #1 [2050051, 2056215] TraG-D_C Maff2 RVT-GII HNHc MFS PRK13858 Feature: gene Location: 2050051-2050881 bp Feature: domain Description: TraG-D_C Location: 2050312-2050666 bp Feature: domain Description: TraG-D_C Location: 205031 2-2050666 bp Feature: gene Location: 2051123-2051254 bp Ori: AVD38229.1 Feature: domain Description: Maff2 Location: 2051126-2051252 bp Feature: domain Description: Maff2 Location: 2051 1 26-2051 252 bp Feature: gene Location: 2051974-2053860 bp Ori: AVD38230.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2052307-2053045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2052307-2053045 bp Feature: domain Description: HNHc Note: nucleases Location: 2053591-2053744 bp Feature: domain Description: HNHc Note: nucleases Location: 2053591 -2053744 bp Feature: gene Location: 2054176-2055396 bp Ori: AVD38231.1 Gene: tet(40) Feature: domain Description: MFS Location: 2054218-2055367 bp Feature: domain Description: MFS Location: 205421 8-2055367 bp Feature: gene Location: 2055817-2056215 bp Ori: AVD38232.1 Gene: mobC Feature: domain Description: PRK13858 Location: 2055853-2056153 bp Feature: domain Description: PRK1 3858 Location: 2055853-20561 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Maff2 (pfam12750), RVT-GII, HNHc (smart00507), MFS (cl28910), PRK13858 (T-DNA border endonuclease VirD1)