myRT

myRT report for GCA_002946595.1_ASM294659v1

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Seq: CP026616.1 Acinetobacter sp. SWBY1 chromosome, complete genome (2914878 bp)
Overview 1 RT 1: 2080077-2085074 bp 2 RT 2: 2630492-2637105 bp Neighborhood of RT #1 [2080077, 2085074] TnpB_IS66 DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C DDE_Tnp_1 Neighborhood of RT #2 [2630492, 2637140] YgfZ PRK09559 2met_isocit_dHY RVT-Retrons DUF1451 DUF4126 Feature: gene Location: 2080077-2080466 bp Ori: AVH49918.1 Feature: domain Description: TnpB_IS66 Location: 2080149-2080437 bp Feature: domain Description: TnpB_IS66 Location: 20801 49-2080437 bp Feature: gene Location: 2080541-2081962 bp Feature: domain Description: DUF3287 Location: 2080565-2080727 bp Feature: domain Description: DUF3287 Location: 2080565-2080727 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2080754-2080979 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2080754-2080979 bp Feature: domain Description: zf-IS66 Location: 2081003-2081129 bp Feature: domain Description: zf-IS66 Location: 2081 003-2081 1 29 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2081171-2081963 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2081 1 71 -2081 963 bp Feature: gene Location: 2082538-2084199 bp Ori: AVH49919.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2082583-2082826 bp Feature: domain Description: RVT_N Location: 2082583-2082826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2082871-2083507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2082871 -2083507 bp Feature: domain Description: GIIM Note: maturase Location: 2083561-2083792 bp Feature: domain Description: GIIM Note: maturase Location: 2083561 -2083792 bp Feature: gene Location: 2084304-2084531 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2084397-2084508 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2084397-2084508 bp Feature: gene Location: 2084546-2085074 bp Ori: AVH49920.1 Feature: domain Description: DDE_Tnp_1 Location: 2084813-2085074 bp Feature: domain Description: DDE_Tnp_1 Location: 208481 3-2085074 bp Feature: gene Location: 2630492-2631214 bp Ori: AVH50367.1 Feature: domain Description: YgfZ Location: 2630513-2630807 bp Feature: domain Description: YgfZ Location: 263051 3-2630807 bp Feature: domain Description: PRK09559 Location: 2630813-2631050 bp Feature: domain Description: PRK09559 Location: 263081 3-2631 050 bp Feature: gene Location: 2631471-2634077 bp Ori: AVH50368.1 Gene: acnD Feature: domain Description: 2met_isocit_dHY Location: 2631477-2634063 bp Feature: domain Description: 2met_isocit_dHY Location: 2631 477-2634063 bp Feature: gene Location: 2634138-2635916 bp Ori: AVH50369.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2634273-2634993 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2634273-2634993 bp Feature: gene Location: 2636317-2636460 bp Ori: AVH50370.1 Feature: domain Description: DUF1451 Location: 2636326-2636446 bp Feature: domain Description: DUF1 451 Location: 2636326-2636446 bp Feature: gene Location: 2636568-2637140 bp Ori: AVH50371.1 Feature: domain Description: DUF4126 Location: 2636589-2637105 bp Feature: domain Description: DUF41 26 Location: 2636589-26371 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), DDE_Tnp_1 (pfam01609)
YgfZ (COG0354), PRK09559 (putative global regulator; Reviewed), 2met_isocit_dHY (TIGR02333), RVT-Retrons, DUF1451 (pfam07295), DUF4126 (pfam13548)