myRT

myRT report for GCA_002946935.1_ASM294693v1

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Seq: CP026680.1 Pseudomonas aeruginosa strain F5677 chromosome, complete genome (6645227 bp)
Overview 1 RT 1: 653253-661416 bp 2 RT 2: 6601008-6604561 bp Neighborhood of RT #1 [653253, 661430] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 Neighborhood of RT #2 [6601008, 6604668] InsE RVT-GII GIIM PHA02517 PIN_NicB-like Feature: gene Location: 653253-654545 bp Ori: AVE31210.1 Feature: domain Description: PRK10770 Location: 653343-654537 bp Feature: domain Description: PRK1 0770 Location: 653343-654537 bp Feature: gene Location: 654526-657297 bp Ori: AVE31211.1 Feature: domain Description: LptD Location: 654721-657283 bp Feature: domain Description: LptD Location: 654721 -657283 bp Feature: gene Location: 657430-659142 bp Ori: AVE31212.1 Gene: ltrA Feature: domain Description: RVT_N Location: 657487-657730 bp Feature: domain Description: RVT_N Location: 657487-657730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 657775-658408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 657775-658408 bp Feature: domain Description: YkfC Location: 658621-658771 bp Feature: domain Description: YkfC Location: 658621 -658771 bp Feature: domain Description: HNH Note: nucleases Location: 658948-659086 bp Feature: domain Description: HNH Note: nucleases Location: 658948-659086 bp Feature: gene Location: 659329-659541 bp Feature: gene Location: 660414-661430 bp Ori: AVE31213.1 Feature: domain Description: COG3178 Location: 660417-661416 bp Feature: domain Description: COG31 78 Location: 66041 7-661 41 6 bp Feature: gene Location: 6601008-6601687 bp Feature: domain Description: InsE Location: 6601017-6601293 bp Feature: domain Description: InsE Location: 6601 01 7-6601 293 bp Feature: gene Location: 6601854-6602204 bp Feature: gene Location: 6602201-6603442 bp Ori: AVE36516.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6602399-6603056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6602399-6603056 bp Feature: domain Description: GIIM Note: maturase Location: 6603134-6603356 bp Feature: domain Description: GIIM Note: maturase Location: 66031 34-6603356 bp Feature: gene Location: 6603522-6603992 bp Feature: domain Description: PHA02517 Location: 6603525-6603981 bp Feature: domain Description: PHA0251 7 Location: 6603525-6603981 bp Feature: gene Location: 6603931-6604668 bp Ori: AVE36517.1 Feature: domain Description: PIN_NicB-like Location: 6603940-6604561 bp Feature: domain Description: PIN_NicB-like Location: 6603940-6604561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), InsE (COG2963), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)
PIN_NicB-like (cd18722)