myRT

myRT report for GCA_002947575.1_ASM294757v1

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Seq: CP026670.1 Streptococcus pneumoniae strain 335 chromosome, complete genome (2221315 bp)
Overview 1 RT 1: 1244849-1254390 bp 2 RT 2: 2156564-2161614 bp Neighborhood of RT #1 [1244849, 1254390] KOG1000 RVT-GII Intron_maturas2 Methyltransf_25 COG4646 Neighborhood of RT #2 [2156564, 2161614] DUF3687 MFS_MefA_like RVT-GII GIIM RVT-GII Feature: gene Location: 1244849-1245133 bp Feature: gene Location: 1245208-1246179 bp Ori: AVD75203.1 Feature: domain Description: KOG1000 Location: 1245235-1245430 bp Feature: domain Description: KOG1 000 Location: 1 245235-1 245430 bp Feature: gene Location: 1246260-1248071 bp Ori: AVD75204.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1246524-1247346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 246524-1 247346 bp Feature: domain Description: Intron_maturas2 Location: 1247415-1247892 bp Feature: domain Description: Intron_maturas2 Location: 1 24741 5-1 247892 bp Feature: gene Location: 1248635-1253932 bp Ori: AVD75205.1 Feature: domain Description: Methyltransf_25 Location: 1250156-1250375 bp Feature: domain Description: Methyltransf_25 Location: 1 2501 56-1 250375 bp Feature: domain Description: COG4646 Location: 1251224-1253528 bp Feature: domain Description: COG4646 Location: 1 251 224-1 253528 bp Feature: gene Location: 1253980-1254390 bp Feature: gene Location: 2156564-2156695 bp Ori: AVD76050.1 Feature: domain Description: DUF3687 Location: 2156576-2156693 bp Feature: domain Description: DUF3687 Location: 21 56576-21 56693 bp Feature: gene Location: 2157009-2158187 bp Ori: AVD76051.1 Feature: domain Description: MFS_MefA_like Location: 2157024-2158167 bp Feature: domain Description: MFS_MefA_like Location: 21 57024-21 581 67 bp Feature: gene Location: 2158643-2159202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2158652-2158745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 58652-21 58745 bp Feature: domain Description: GIIM Note: maturase Location: 2158799-2158928 bp Feature: domain Description: GIIM Note: maturase Location: 21 58799-21 58928 bp Feature: gene Location: 2159505-2159879 bp Ori: AVD76182.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2159670-2159877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 59670-21 59877 bp Feature: gene Location: 2160676-2160873 bp Feature: gene Location: 2161027-2161614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), Methyltransf_25 (pfam13649), COG4646 (Adenine-specific DNA methylase, N12 class ), DUF3687 (pfam12459), MFS_MefA_like (cd06173), GIIM (pfam08388)