myRT

myRT report for GCA_002947755.1_ASM294775v1

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Seq: CP026720.1 UNVERIFIED_ORG: Enterobacter cloacae strain AR_0060 plasmid unitig_2_pilon, complete sequence (77822 bp)
Overview 1 RT 1: 33021-36478 bp Neighborhood of RT #1 [33021, 36495] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 DDE_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 33021-33329 bp Feature: domain Description: Rep_3 Location: 33027-33291 bp Feature: domain Description: Rep_3 Location: 33027-33291 bp Feature: gene Location: 33339-34019 bp Feature: domain Description: Zn_Tnp_IS1 Location: 33345-33447 bp Feature: domain Description: Zn_Tnp_IS1 Location: 33345-33447 bp Feature: domain Description: HTH_Tnp_IS1 Location: 33468-33600 bp Feature: domain Description: HTH_Tnp_IS1 Location: 33468-33600 bp Feature: domain Description: DDE_Tnp_IS1 Location: 33750-34017 bp Feature: domain Description: DDE_Tnp_IS1 Location: 33750-3401 7 bp Feature: gene Location: 34171-35655 bp Ori: AVE75684.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34573-35263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34573-35263 bp Feature: gene Location: 35655-35906 bp Feature: gene Location: 36064-36495 bp Ori: AVE75686.1 Feature: domain Description: PRK10276 Location: 36115-36478 bp Feature: domain Description: PRK1 0276 Location: 361 1 5-36478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), DDE_Tnp_IS1 (pfam03400), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP026719.1 UNVERIFIED_ORG: Enterobacter cloacae strain AR_0060 chromosome, complete genome (5104736 bp)
Overview 1 RT 1: 244042-247350 bp 2 RT 2: 1287887-1291917 bp Neighborhood of RT #1 [244042, 247355] PHA02517 RVT-GII GIIM PHA02517 DDE_Tnp_IS66_C Neighborhood of RT #2 [1287887, 1292326] fghA_ester_D PHA02517 RVT-GII GIIM InsE Feature: gene Location: 244042-244325 bp Feature: domain Description: PHA02517 Location: 244051-244312 bp Feature: domain Description: PHA02 517 Location: 2 44051-2 44312 bp Feature: gene Location: 244327-244689 bp Feature: gene Location: 244983-246506 bp Ori: AVE71160.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245256-245988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 452 56-2 45988 bp Feature: domain Description: GIIM Note: maturase Location: 246063-246261 bp Feature: domain Description: GIIM Note: maturase Location: 2 46063-2 462 61 bp Feature: gene Location: 246587-247075 bp Feature: domain Description: PHA02517 Location: 246590-247055 bp Feature: domain Description: PHA02 517 Location: 2 46590-2 47055 bp Feature: gene Location: 247239-247355 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 247275-247350 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 472 75-2 47350 bp Feature: gene Location: 1287887-1288723 bp Ori: AVE72047.1 Gene: fghA Feature: domain Description: fghA_ester_D Location: 1287893-1288709 bp Feature: domain Description: fghA_ester_D Location: 12 87893-12 88709 bp Feature: gene Location: 1288923-1289379 bp Feature: domain Description: PHA02517 Location: 1288926-1289277 bp Feature: domain Description: PHA02 517 Location: 12 8892 6-12 892 77 bp Feature: gene Location: 1289460-1290983 bp Ori: AVE72048.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1289733-1290465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 89733-12 90465 bp Feature: domain Description: GIIM Note: maturase Location: 1290540-1290738 bp Feature: domain Description: GIIM Note: maturase Location: 12 90540-12 90738 bp Feature: gene Location: 1291277-1291648 bp Feature: gene Location: 1291641-1292326 bp Feature: domain Description: InsE Location: 1291653-1291917 bp Feature: domain Description: InsE Location: 12 91653-12 91917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), fghA_ester_D (TIGR02821), InsE (COG2963)