myRT

myRT report for GCA_002948565.1_ASM294856v1

Download annotations/find similar RTs

Seq: CP026751.1 Klebsiella pneumoniae strain AR_0066 chromosome, complete genome (5451057 bp)
Overview 1 RT 1: 966407-970506 bp 2 RT 2: 3879711-3887059 bp 3 RT 3: 4673781-4676738 bp 4 RT 4: 4979679-4984551 bp 5 RT 5: 5176429-5179387 bp Neighborhood of RT #1 [966407, 970517] umuC PRK10276 RVT-GII DinI Neighborhood of RT #2 [3879711, 3887109] FimC FimD RVT-UG4 Integrase_1 PRK09692 Neighborhood of RT #3 [4673781, 4676941] RVT-GII PRK10276 Neighborhood of RT #4 [4979679, 4984565] dacD RVT-GII PRK10016 YccC Neighborhood of RT #5 [5176429, 5179581] RVT-GII PRK10276 Feature: gene Location: 966407-967672 bp Ori: AVF10516.1 Feature: domain Description: umuC Location: 966410-967670 bp Feature: domain Description: umuC Location: 96641 0-967670 bp Feature: gene Location: 967675-968094 bp Ori: AVF10517.1 Feature: domain Description: PRK10276 Location: 967678-968089 bp Feature: domain Description: PRK1 0276 Location: 967678-968089 bp Feature: gene Location: 968173-969657 bp Ori: AVF10518.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 968575-969265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 968575-969265 bp Feature: gene Location: 969657-969908 bp Feature: gene Location: 970275-970517 bp Ori: AVF10520.1 Feature: domain Description: DinI Location: 970326-970506 bp Feature: domain Description: DinI Location: 970326-970506 bp Feature: gene Location: 3879711-3880475 bp Ori: AVF13123.1 Feature: domain Description: FimC Location: 3879756-3880458 bp Feature: domain Description: FimC Location: 3879756-3880458 bp Feature: gene Location: 3880522-3883116 bp Ori: AVF13124.1 Feature: domain Description: FimD Location: 3880564-3883105 bp Feature: domain Description: FimD Location: 3880564-38831 05 bp Feature: gene Location: 3883113-3885194 bp Ori: AVF13125.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3883524-3883968 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3883524-3883968 bp Feature: gene Location: 3885236-3885691 bp Ori: AVF13126.1 Feature: domain Description: Integrase_1 Location: 3885239-3885473 bp Feature: domain Description: Integrase_1 Location: 3885239-3885473 bp Feature: gene Location: 3885871-3887109 bp Feature: domain Description: PRK09692 Location: 3885877-3887059 bp Feature: domain Description: PRK09692 Location: 3885877-3887059 bp Feature: gene Location: 4673781-4674110 bp Feature: gene Location: 4674564-4674815 bp Feature: gene Location: 4674815-4676299 bp Ori: AVF13891.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4675217-4675907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 467521 7-4675907 bp Feature: gene Location: 4676374-4676613 bp Feature: gene Location: 4676570-4676941 bp Ori: AVF13893.1 Feature: domain Description: PRK10276 Location: 4676615-4676738 bp Feature: domain Description: PRK1 0276 Location: 467661 5-4676738 bp Feature: gene Location: 4979679-4980848 bp Ori: AVF14138.1 Feature: domain Description: dacD Location: 4979688-4980843 bp Feature: domain Description: dacD Location: 4979688-4980843 bp Feature: gene Location: 4981021-4981236 bp Feature: gene Location: 4981369-4982853 bp Ori: AVF14139.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4981771-4982461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4981 771 -4982461 bp Feature: gene Location: 4982935-4983408 bp Ori: AVF14140.1 Feature: domain Description: PRK10016 Location: 4982938-4983397 bp Feature: domain Description: PRK1 001 6 Location: 4982938-4983397 bp Feature: gene Location: 4983507-4984565 bp Ori: AVF14141.1 Feature: domain Description: YccC Location: 4983513-4984551 bp Feature: domain Description: YccC Location: 498351 3-4984551 bp Feature: gene Location: 5176429-5176758 bp Feature: gene Location: 5177212-5177463 bp Feature: gene Location: 5177463-5178947 bp Ori: AVF14327.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5177865-5178555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 77865-51 78555 bp Feature: gene Location: 5179025-5179264 bp Feature: gene Location: 5179264-5179581 bp Ori: AVF14329.1 Feature: domain Description: PRK10276 Location: 5179270-5179387 bp Feature: domain Description: PRK1 0276 Location: 51 79270-51 79387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183), FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional), dacD (PRK11397)
PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)

Seq: CP026752.1 Klebsiella pneumoniae strain AR_0066 plasmid tig00000080_pilon, complete sequence (211813 bp)
Overview 1 RT 1: 114718-117834 bp Neighborhood of RT #1 [114718, 117834] PRK10276 RVT-GII Feature: gene Location: 114718-115143 bp Ori: AVF14906.1 Feature: domain Description: PRK10276 Location: 114721-115129 bp Feature: domain Description: PRK102 76 Location: 11472 1-11512 9 bp Feature: gene Location: 115298-115549 bp Feature: gene Location: 115549-117033 bp Ori: AVF14908.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115951-116641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115951-116641 bp Feature: gene Location: 117267-117497 bp Feature: gene Location: 117556-117834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CP026753.1 Klebsiella pneumoniae strain AR_0066 plasmid tig00000084_pilon, complete sequence (70730 bp)
Overview 1 RT 1: 25954-29696 bp Neighborhood of RT #1 [25954, 29713] ArdC RVT-GII PRK10276 Feature: gene Location: 25954-26919 bp Ori: AVF15042.1 Feature: domain Description: ArdC Location: 26080-26914 bp Feature: domain Description: ArdC Location: 26080-26914 bp Feature: gene Location: 27127-27396 bp Feature: gene Location: 27389-28873 bp Ori: AVF15044.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27791-28481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27791-28481 bp Feature: gene Location: 28873-29124 bp Feature: gene Location: 29282-29713 bp Ori: AVF15046.1 Feature: domain Description: PRK10276 Location: 29333-29696 bp Feature: domain Description: PRK10276 Location: 293 3 3 -29696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)