myRT

myRT report for GCA_002949175.1_ASM294917v1

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Seq: CP026763.1 Shigella boydii strain NCTC 9850 plasmid unnamed (150497 bp)
Overview 1 RT 1: 23319-26617 bp 2 RT 2: 98786-101804 bp Neighborhood of RT #1 [23319, 26637] PHA02517 InsE RVT-GII Tra5 PAP2_acid_phosphatase Neighborhood of RT #2 [98786, 101818] InsE DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 23319-24206 bp Feature: domain Description: PHA02517 Location: 23379-24204 bp Feature: domain Description: PHA0251 7 Location: 23379-24204 bp Feature: gene Location: 24206-24532 bp Feature: domain Description: InsE Location: 24209-24530 bp Feature: domain Description: InsE Location: 24209-24530 bp Feature: gene Location: 24584-25279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24884-25277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24884-25277 bp Feature: gene Location: 25292-25513 bp Feature: domain Description: Tra5 Location: 25304-25496 bp Feature: domain Description: Tra5 Location: 25304-25496 bp Feature: gene Location: 25888-26637 bp Feature: domain Description: PAP2_acid_phosphatase Location: 25963-26617 bp Feature: domain Description: PAP2_acid_phosphatase Location: 25963-2661 7 bp Feature: gene Location: 98786-99112 bp Feature: domain Description: InsE Location: 98789-99110 bp Feature: domain Description: InsE Location: 98789-991 1 0 bp Feature: gene Location: 99218-99349 bp Feature: domain Description: DDE_Tnp_IS66 Location: 99230-99323 bp Feature: domain Description: DDE_Tnp_IS66 Location: 99230-99323 bp Feature: gene Location: 99911-101044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100013-100667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0001 3-1 00667 bp Feature: domain Description: GIIM Note: maturase Location: 100745-100967 bp Feature: domain Description: GIIM Note: maturase Location: 1 00745-1 00967 bp Feature: gene Location: 101160-101306 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 101172-101283 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 01 1 72-1 01 283 bp Feature: gene Location: 101333-101818 bp Feature: domain Description: COG3547 Location: 101351-101804 bp Feature: domain Description: COG3547 Location: 1 01 351 -1 01 804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, Tra5 (COG2801), PAP2_acid_phosphatase (cd03397), DDE_Tnp_IS66 (pfam03050), GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )