myRT

myRT report for GCA_002949695.1_ASM294969v1

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Seq: CP026776.1 Shigella flexneri strain 98-3193 chromosome, complete genome (4508802 bp)
Overview 1 RT 1: 7977-12070 bp 2 RT 2: 1239154-1241846 bp Neighborhood of RT #1 [7977, 12135] COG3547 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [1239154, 1241846] RVT-GII GIIM Feature: gene Location: 7977-9053 bp Feature: domain Description: COG3547 Location: 8016-8937 bp Feature: domain Description: COG3547 Location: 801 6-8937 bp Feature: gene Location: 9305-9508 bp Feature: gene Location: 9595-11118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9868-10600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9868-1 0600 bp Feature: domain Description: GIIM Note: maturase Location: 10675-10873 bp Feature: domain Description: GIIM Note: maturase Location: 1 0675-1 0873 bp Feature: gene Location: 11072-11497 bp Feature: gene Location: 11710-12135 bp Feature: domain Description: PHA02517 Location: 11734-12070 bp Feature: domain Description: PHA0251 7 Location: 1 1 734-1 2070 bp Feature: gene Location: 1239154-1239297 bp Feature: gene Location: 1239322-1239525 bp Feature: gene Location: 1239593-1241116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1239866-1240598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 239866-1 240598 bp Feature: domain Description: GIIM Note: maturase Location: 1240673-1240871 bp Feature: domain Description: GIIM Note: maturase Location: 1 240673-1 240871 bp Feature: gene Location: 1241140-1241415 bp Feature: gene Location: 1241409-1241846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)