myRT

myRT report for GCA_002949835.1_ASM294983v1

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Seq: CP026786.1 Shigella dysenteriae strain NCTC 9718 chromosome, complete genome (4371869 bp)
Overview 1 RT 1: 2212687-2215217 bp Neighborhood of RT #1 [2212687, 2215231] pyrE RVT-Retrons slmA Feature: gene Location: 2212687-2213343 bp Feature: domain Description: pyrE Location: 2212705-2213338 bp Feature: domain Description: pyrE Location: 221 2705-221 3338 bp Feature: gene Location: 2213476-2213754 bp Feature: gene Location: 2213797-2214306 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2213803-2214298 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 221 3803-221 4298 bp Feature: gene Location: 2214392-2214589 bp Feature: gene Location: 2214635-2215231 bp Feature: domain Description: slmA Location: 2214641-2215217 bp Feature: domain Description: slmA Location: 221 4641 -221 521 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480)

Seq: CP026787.1 Shigella dysenteriae strain NCTC 9718 plasmid unnamed (189871 bp)
Overview 1 RT 1: 36610-39263 bp Neighborhood of RT #1 [36610, 39263] COG3547 RVT-GII GIIM Feature: gene Location: 36610-37095 bp Feature: domain Description: COG3547 Location: 36628-37081 bp Feature: domain Description: COG3547 Location: 3662 8-37081 bp Feature: gene Location: 37191-37358 bp Feature: gene Location: 37384-38616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37585-38239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37585-382 39 bp Feature: domain Description: GIIM Note: maturase Location: 38317-38539 bp Feature: domain Description: GIIM Note: maturase Location: 38317-38539 bp Feature: gene Location: 38611-39015 bp Feature: gene Location: 39012-39263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)