myRT

myRT report for GCA_002950015.1_ASM295001v1

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Seq: CP026829.1 Shigella dysenteriae strain ATCC 12037 plasmid unnamed, complete sequence (216328 bp)
Overview 1 RT 1: 57077-60446 bp 2 RT 2: 151493-152646 bp Neighborhood of RT #1 [57077, 60460] PHA02517 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Neighborhood of RT #2 [151493, 152646] Tra5 RVT-GII InsE Feature: gene Location: 57077-57778 bp Feature: domain Description: PHA02517 Location: 57083-57764 bp Feature: domain Description: PHA0251 7 Location: 57083-57764 bp Feature: gene Location: 57860-57991 bp Feature: domain Description: DDE_Tnp_IS66 Location: 57872-57965 bp Feature: domain Description: DDE_Tnp_IS66 Location: 57872-57965 bp Feature: gene Location: 58469-59686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58655-59309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58655-59309 bp Feature: domain Description: GIIM Note: maturase Location: 59387-59609 bp Feature: domain Description: GIIM Note: maturase Location: 59387-59609 bp Feature: gene Location: 59802-59948 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 59814-59925 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5981 4-59925 bp Feature: gene Location: 59975-60460 bp Feature: domain Description: COG3547 Location: 59993-60446 bp Feature: domain Description: COG3547 Location: 59993-60446 bp Feature: gene Location: 151493-151714 bp Feature: domain Description: Tra5 Location: 151505-151697 bp Feature: domain Description: Tra5 Location: 1 51 505-1 51 697 bp Feature: gene Location: 151727-151936 bp Feature: gene Location: 151992-152144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151995-152115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 995-1 521 1 5 bp Feature: gene Location: 152170-152496 bp Feature: domain Description: InsE Location: 152173-152494 bp Feature: domain Description: InsE Location: 1 521 73-1 52494 bp Feature: gene Location: 152518-152646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), Tra5 (COG2801), InsE (COG2963)