myRT

myRT report for GCA_002950055.1_ASM295005v1

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Seq: CP026831.1 Shigella dysenteriae strain ATCC 12039 chromosome, complete genome (4880735 bp)
Overview 1 RT 1: 1458126-1461515 bp Neighborhood of RT #1 [1458126, 1461523] RVT-AbiP2 Q Feature: gene Location: 1458126-1458386 bp Feature: gene Location: 1458707-1459069 bp Feature: gene Location: 1459171-1460094 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1459588-1460041 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 459588-1 460041 bp Feature: gene Location: 1460289-1460450 bp Feature: gene Location: 1460489-1461523 bp Feature: domain Description: Q Location: 1460492-1461515 bp Feature: domain Description: Q Location: 1 460492-1 461 51 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, Q (PHA02536)

Seq: CP026830.1 Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence (181100 bp)
Overview 1 RT 1: 67620-70977 bp 2 RT 2: 175062-177458 bp Neighborhood of RT #1 [67620, 70988] PRK08943 HTH_23 InsE RVT-GII PHA02517 Neighborhood of RT #2 [175062, 177458] TnpB_IS66 InsE RVT-GII Feature: gene Location: 67620-68564 bp Feature: domain Description: PRK08943 Location: 67623-68559 bp Feature: domain Description: PRK08943 Location: 6762 3-68559 bp Feature: gene Location: 68738-69406 bp Feature: domain Description: HTH_23 Location: 68846-68933 bp Feature: domain Description: HTH_2 3 Location: 68846-68933 bp Feature: domain Description: InsE Location: 69062-69257 bp Feature: domain Description: InsE Location: 69062 -692 57 bp Feature: gene Location: 69500-69760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69503-69734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69503-69734 bp Feature: gene Location: 69770-70198 bp Feature: gene Location: 70275-70988 bp Feature: domain Description: PHA02517 Location: 70293-70977 bp Feature: domain Description: PHA02 517 Location: 702 93-70977 bp Feature: gene Location: 175062-175355 bp Feature: domain Description: TnpB_IS66 Location: 175065-175326 bp Feature: domain Description: TnpB_IS66 Location: 175065-17532 6 bp Feature: gene Location: 175406-175795 bp Feature: domain Description: InsE Location: 175439-175784 bp Feature: domain Description: InsE Location: 175439-175784 bp Feature: gene Location: 175874-176707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175976-176630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175976-176630 bp Feature: gene Location: 176800-177219 bp Feature: gene Location: 177264-177458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08943 (lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated), HTH_23 (pfam13384), InsE (COG2963), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), TnpB_IS66 (pfam05717)