myRT

myRT report for GCA_002950075.1_ASM295007v1

Download annotations/find similar RTs

Seq: CP026833.1 Shigella dysenteriae strain ATCC 49346 plasmid unnamed, complete sequence (224419 bp)
Overview 1 RT 1: 945-3598 bp 2 RT 2: 130141-132608 bp Neighborhood of RT #1 [945, 3598] COG3547 RVT-GII GIIM RVT-GII Neighborhood of RT #2 [130141, 132613] PHA02517 InsE RVT-GII Tra5 InsA Feature: gene Location: 945-1430 bp Feature: domain Description: COG3547 Location: 963-1416 bp Feature: domain Description: COG3547 Location: 963-1 41 6 bp Feature: gene Location: 1526-1693 bp Feature: gene Location: 1719-2246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1725-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 725-1 869 bp Feature: domain Description: GIIM Note: maturase Location: 1947-2169 bp Feature: domain Description: GIIM Note: maturase Location: 1 947-21 69 bp Feature: gene Location: 2261-2935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2447-2909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2447-2909 bp Feature: gene Location: 2946-3365 bp Feature: gene Location: 3404-3598 bp Feature: gene Location: 130141-131028 bp Feature: domain Description: PHA02517 Location: 130201-131026 bp Feature: domain Description: PHA0251 7 Location: 1 30201 -1 31 026 bp Feature: gene Location: 131028-131354 bp Feature: domain Description: InsE Location: 131031-131352 bp Feature: domain Description: InsE Location: 1 31 031 -1 31 352 bp Feature: gene Location: 131380-132027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131680-131998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 680-1 31 998 bp Feature: gene Location: 132040-132261 bp Feature: domain Description: Tra5 Location: 132052-132244 bp Feature: domain Description: Tra5 Location: 1 32052-1 32244 bp Feature: gene Location: 132338-132613 bp Feature: domain Description: InsA Location: 132341-132608 bp Feature: domain Description: InsA Location: 1 32341 -1 32608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), Tra5 (COG2801), InsA (COG3677)