myRT

myRT report for GCA_002950175.1_ASM295017v1

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Seq: CP026843.1 Shigella dysenteriae strain ATCC 9754 plasmid unnamed, complete sequence (106437 bp)
Overview 1 RT 1: 11283-14390 bp Neighborhood of RT #1 [11283, 14401] PHA02517 DDE_Tnp_IS66 RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 11283-11942 bp Feature: domain Description: PHA02517 Location: 11286-11928 bp Feature: domain Description: PHA0251 7 Location: 1 1 286-1 1 928 bp Feature: gene Location: 12024-12155 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12036-12129 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 2036-1 21 29 bp Feature: gene Location: 12616-13305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12817-13279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 281 7-1 3279 bp Feature: gene Location: 13320-13847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13326-13470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3326-1 3470 bp Feature: domain Description: GIIM Note: maturase Location: 13548-13770 bp Feature: domain Description: GIIM Note: maturase Location: 1 3548-1 3770 bp Feature: gene Location: 13962-14108 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 13974-14085 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 3974-1 4085 bp Feature: gene Location: 14135-14401 bp Feature: domain Description: COG3547 Location: 14144-14390 bp Feature: domain Description: COG3547 Location: 1 41 44-1 4390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )