myRT

myRT report for GCA_002950215.1_ASM295021v1

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Seq: CP026788.1 Shigella flexneri 2a strain ATCC 29903 chromosome, complete genome (4659463 bp)
Overview 1 RT 1: 226750-229851 bp 2 RT 2: 3874874-3882290 bp Neighborhood of RT #1 [226750, 229916] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [3874874, 3882292] PHA02517 RVT-GII GIIM PHA02517 ESPR Peptidase_S6 autotrans_barl Feature: gene Location: 226750-226923 bp Feature: gene Location: 226999-227445 bp Feature: domain Description: PHA02517 Location: 227002-227443 bp Feature: domain Description: PHA0251 7 Location: 227002-227443 bp Feature: gene Location: 227562-229085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227835-228567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227835-228567 bp Feature: domain Description: GIIM Note: maturase Location: 228642-228840 bp Feature: domain Description: GIIM Note: maturase Location: 228642-228840 bp Feature: gene Location: 229039-229464 bp Feature: gene Location: 229677-229916 bp Feature: domain Description: PHA02517 Location: 229680-229851 bp Feature: domain Description: PHA0251 7 Location: 229680-229851 bp Feature: gene Location: 3874874-3875002 bp Feature: gene Location: 3875092-3875331 bp Feature: domain Description: PHA02517 Location: 3875095-3875266 bp Feature: domain Description: PHA0251 7 Location: 3875095-3875266 bp Feature: gene Location: 3875923-3877446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3876196-3876928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38761 96-3876928 bp Feature: domain Description: GIIM Note: maturase Location: 3877003-3877201 bp Feature: domain Description: GIIM Note: maturase Location: 3877003-3877201 bp Feature: gene Location: 3877623-3878009 bp Feature: domain Description: PHA02517 Location: 3877626-3878007 bp Feature: domain Description: PHA0251 7 Location: 3877626-3878007 bp Feature: gene Location: 3878174-3882292 bp Feature: domain Description: ESPR Location: 3878177-3878246 bp Feature: domain Description: ESPR Location: 38781 77-3878246 bp Feature: domain Description: Peptidase_S6 Location: 3878327-3880499 bp Feature: domain Description: Peptidase_S6 Location: 3878327-3880499 bp Feature: domain Description: autotrans_barl Location: 3881063-3882290 bp Feature: domain Description: autotrans_barl Location: 3881 063-3882290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), ESPR (pfam13018), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)

Seq: CP026789.1 Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence (113130 bp)
Overview 1 RT 1: 43452-46105 bp Neighborhood of RT #1 [43452, 46105] COG3547 RVT-GII GIIM Feature: gene Location: 43452-43937 bp Feature: domain Description: COG3547 Location: 43470-43923 bp Feature: domain Description: COG3547 Location: 43470-4392 3 bp Feature: gene Location: 44033-44200 bp Feature: gene Location: 44226-45443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44412-45066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44412 -45066 bp Feature: domain Description: GIIM Note: maturase Location: 45144-45366 bp Feature: domain Description: GIIM Note: maturase Location: 45144-45366 bp Feature: gene Location: 45454-45837 bp Feature: gene Location: 45911-46105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)