myRT

myRT report for GCA_002950315.1_ASM295031v1

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Seq: CP026798.1 Shigella boydii strain NCTC 9353 plasmid unnamed, complete sequence (146337 bp)
Overview 1 RT 1: 1-1224 bp 2 RT 2: 71903-75218 bp 3 RT 3: 144907-146257 bp Neighborhood of RT #1 [1, 1224] RVT-GII Neighborhood of RT #2 [71903, 75220] PAP2_acid_phosphatase Tra5 RVT-GII InsE PHA02517 Neighborhood of RT #3 [144907, 146334] COG3547 RVT-GII GIIM Feature: gene Location: 1-561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 87-562 bp Feature: gene Location: 572-991 bp Feature: gene Location: 1030-1224 bp Feature: gene Location: 71903-72652 bp Feature: domain Description: PAP2_acid_phosphatase Location: 71978-72632 bp Feature: domain Description: PAP2_acid_phosphatase Location: 71 978-72632 bp Feature: gene Location: 73027-73248 bp Feature: domain Description: Tra5 Location: 73039-73231 bp Feature: domain Description: Tra5 Location: 73039-73231 bp Feature: gene Location: 73261-74001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73561-73951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73561 -73951 bp Feature: gene Location: 74007-74333 bp Feature: domain Description: InsE Location: 74010-74331 bp Feature: domain Description: InsE Location: 7401 0-74331 bp Feature: gene Location: 74573-75220 bp Feature: domain Description: PHA02517 Location: 74576-75218 bp Feature: domain Description: PHA0251 7 Location: 74576-7521 8 bp Feature: gene Location: 144907-145392 bp Feature: domain Description: COG3547 Location: 144925-145378 bp Feature: domain Description: COG3547 Location: 1 44925-1 45378 bp Feature: gene Location: 145488-145655 bp Feature: gene Location: 145681-146334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145684-145957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 45684-1 45957 bp Feature: domain Description: GIIM Note: maturase Location: 146035-146257 bp Feature: domain Description: GIIM Note: maturase Location: 1 46035-1 46257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PAP2_acid_phosphatase (cd03397), Tra5 (COG2801), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase ), GIIM (pfam08388)