myRT

myRT report for GCA_002951655.1_ASM295165v1

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Seq: CP019273.1 Escherichia coli strain 13P477T chromosome, complete genome (5050984 bp)
Overview 1 RT 1: 2910621-2915669 bp 2 RT 2: 4404821-4407772 bp Neighborhood of RT #1 [2910621, 2915680] prfC PRK10597 RVT-Retrons TIR_2 SR_ResInv Caudo_TAP Neighborhood of RT #2 [4404821, 4407822] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 2910621-2912207 bp Ori: AUZ14028.1 Feature: domain Description: prfC Location: 2910639-2912205 bp Feature: domain Description: prfC Location: 291 0639-291 2205 bp Feature: gene Location: 2912427-2912687 bp Ori: AUZ14029.1 Feature: domain Description: PRK10597 Location: 2912430-2912670 bp Feature: domain Description: PRK1 0597 Location: 291 2430-291 2670 bp Feature: gene Location: 2913047-2914651 bp Ori: AUZ14030.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2913338-2913929 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 291 3338-291 3929 bp Feature: domain Description: TIR_2 Location: 2914256-2914544 bp Feature: domain Description: TIR_2 Location: 291 4256-291 4544 bp Feature: gene Location: 2914789-2915038 bp Feature: domain Description: SR_ResInv Location: 2914801-2914912 bp Feature: domain Description: SR_ResInv Location: 291 4801 -291 491 2 bp Feature: gene Location: 2915096-2915680 bp Ori: AUZ14031.1 Feature: domain Description: Caudo_TAP Location: 2915312-2915669 bp Feature: domain Description: Caudo_TAP Location: 291 531 2-291 5669 bp Feature: gene Location: 4404821-4405192 bp Feature: gene Location: 4405107-4405532 bp Feature: gene Location: 4405486-4407009 bp Ori: AUZ15421.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4405759-4406491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4405759-4406491 bp Feature: domain Description: GIIM Note: maturase Location: 4406566-4406764 bp Feature: domain Description: GIIM Note: maturase Location: 4406566-4406764 bp Feature: gene Location: 4407090-4407578 bp Feature: domain Description: PHA02517 Location: 4407093-4407567 bp Feature: domain Description: PHA0251 7 Location: 4407093-4407567 bp Feature: gene Location: 4407571-4407822 bp Ori: AUZ15422.1 Feature: domain Description: InsE Location: 4407586-4407772 bp Feature: domain Description: InsE Location: 4407586-4407772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676), SR_ResInv (cd03768), Caudo_TAP (pfam02413), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)