myRT

myRT report for GCA_002951695.1_ASM295169v1

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Seq: CP019246.1 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence (45156 bp)
Overview 1 RT 1: 3905-9534 bp Neighborhood of RT #1 [3905, 9539] RVT-Retrons Q P Feature: gene Location: 3905-4240 bp Feature: gene Location: 4856-5602 bp Feature: gene Location: 5824-6321 bp Ori: AUY78471.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5875-6313 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5875-631 3 bp Feature: gene Location: 6777-7773 bp Feature: domain Description: Q Location: 6780-7347 bp Feature: domain Description: Q Location: 6780-7347 bp Feature: gene Location: 7773-9539 bp Ori: AUY78472.1 Feature: domain Description: P Location: 7800-9534 bp Feature: domain Description: P Location: 7800-9534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536), P (PHA02535)

Seq: CP019245.1 Escherichia coli strain Combat13F7 chromosome, complete genome (4729175 bp)
Overview 1 RT 1: 25014-30640 bp 2 RT 2: 3061776-3064993 bp 3 RT 3: 3386411-3393782 bp Neighborhood of RT #1 [25014, 30640] P Q RVT-Retrons Neighborhood of RT #2 [3061776, 3065805] HTH_XRE RVT-Retrons MobA_MobL Neighborhood of RT #3 [3386411, 3393796] DUF5405 Phage_GPA RVT-AbiP2 Q P Feature: gene Location: 25014-26780 bp Ori: AUY73971.1 Feature: domain Description: P Location: 25041-26775 bp Feature: domain Description: P Location: 2 5041-2 6775 bp Feature: gene Location: 26780-27805 bp Ori: AUY73972.1 Feature: domain Description: Q Location: 26783-27797 bp Feature: domain Description: Q Location: 2 6783-2 7797 bp Feature: gene Location: 27841-28770 bp Ori: AUY73973.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27940-28525 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 7940-2 852 5 bp Feature: gene Location: 29024-29689 bp Feature: gene Location: 30305-30640 bp Feature: gene Location: 3061776-3061991 bp Feature: gene Location: 3062082-3062363 bp Ori: AUY76726.1 Feature: domain Description: HTH_XRE Location: 3062097-3062262 bp Feature: domain Description: HTH_XRE Location: 3062 097-3062 2 62 bp Feature: gene Location: 3062356-3063458 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3062497-3062698 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3062 497-3062 698 bp Feature: gene Location: 3063677-3064327 bp Feature: gene Location: 3064405-3065805 bp Ori: AUY76727.1 Feature: domain Description: MobA_MobL Location: 3064456-3064993 bp Feature: domain Description: MobA_MobL Location: 3064456-3064993 bp Feature: gene Location: 3386411-3386686 bp Ori: AUY77017.1 Feature: domain Description: DUF5405 Location: 3386429-3386669 bp Feature: domain Description: DUF5405 Location: 338642 9-3386669 bp Feature: gene Location: 3386676-3388961 bp Ori: AUY77018.1 Feature: domain Description: Phage_GPA Location: 3387075-3388062 bp Feature: domain Description: Phage_GPA Location: 3387075-3388062 bp Feature: gene Location: 3389065-3390612 bp Ori: AUY78394.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3389482-3389935 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3389482 -3389935 bp Feature: gene Location: 3390990-3392024 bp Ori: AUY77019.1 Feature: domain Description: Q Location: 3390993-3392016 bp Feature: domain Description: Q Location: 3390993-3392 016 bp Feature: gene Location: 3392024-3393796 bp Ori: AUY77020.1 Feature: domain Description: P Location: 3392051-3393782 bp Feature: domain Description: P Location: 3392 051-3393782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons, HTH_XRE (smart00530), MobA_MobL (pfam03389), DUF5405 (pfam17399), Phage_GPA (pfam05840), RVT-AbiP2