myRT

myRT report for GCA_002951735.1_ASM295173v1

Download annotations/find similar RTs

Seq: CP019281.1 Escherichia coli strain 13P484A plasmid p13P484A-1, complete sequence (33754 bp)
Overview 1 RT 1: 17042-20147 bp Neighborhood of RT #1 [17042, 20147] Caudo_TAP RVT-Retrons PRK10597 Feature: gene Location: 17042-17182 bp Ori: AUZ03472.1 Feature: domain Description: Caudo_TAP Location: 17051-17171 bp Feature: domain Description: Caudo_TAP Location: 1 7051 -1 71 71 bp Feature: gene Location: 17169-17489 bp Feature: gene Location: 17627-19232 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17918-18326 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 791 8-1 8326 bp Feature: gene Location: 19590-19850 bp Ori: AUZ03473.1 Feature: domain Description: PRK10597 Location: 19593-19833 bp Feature: domain Description: PRK1 0597 Location: 1 9593-1 9833 bp Feature: gene Location: 19965-20147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Caudo_TAP (pfam02413), RVT-Retrons, PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: CP019282.1 Escherichia coli strain 13P484A plasmid p13P484A-2, complete sequence (149520 bp)
Overview 1 RT 1: 73812-76979 bp Neighborhood of RT #1 [73812, 76979] PHA02517 PHA02517 RVT-GII GIIM Feature: gene Location: 73812-74080 bp Feature: domain Description: PHA02517 Location: 73815-73938 bp Feature: domain Description: PHA02 517 Location: 73815-73938 bp Feature: gene Location: 74228-74701 bp Feature: domain Description: PHA02517 Location: 74234-74699 bp Feature: domain Description: PHA02 517 Location: 742 34-74699 bp Feature: gene Location: 74791-76314 bp Ori: AUZ03547.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75064-75796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75064-75796 bp Feature: domain Description: GIIM Note: maturase Location: 75871-76069 bp Feature: domain Description: GIIM Note: maturase Location: 75871-76069 bp Feature: gene Location: 76385-76693 bp Feature: gene Location: 76608-76979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CP019280.1 Escherichia coli strain 13P484A chromosome, complete genome (4724424 bp)
Overview 1 RT 1: 12296-16907 bp Neighborhood of RT #1 [12296, 16909] Caudo_TAP RVT-Retrons TIR_2 PRK10597 prfC Feature: gene Location: 12296-12436 bp Ori: AUY99031.1 Feature: domain Description: Caudo_TAP Location: 12305-12425 bp Feature: domain Description: Caudo_TAP Location: 123 05-12425 bp Feature: gene Location: 12423-12743 bp Feature: gene Location: 12881-14485 bp Ori: AUY99032.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13172-13763 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 172-13 763 bp Feature: domain Description: TIR_2 Location: 14090-14423 bp Feature: domain Description: TIR_2 Location: 14090-14423 bp Feature: gene Location: 14843-15103 bp Ori: AUY99033.1 Feature: domain Description: PRK10597 Location: 14846-15086 bp Feature: domain Description: PRK10597 Location: 14846-15086 bp Feature: gene Location: 15323-16909 bp Ori: AUY99034.1 Gene: prfC Feature: domain Description: prfC Location: 15341-16907 bp Feature: domain Description: prfC Location: 153 41-16907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Caudo_TAP (pfam02413), RVT-Retrons, TIR_2 (pfam13676), PRK10597 (DNA damage-inducible protein I; Provisional), prfC (TIGR00503)