myRT

myRT report for GCA_002951775.1_ASM295177v1

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Seq: CP019262.1 Escherichia coli strain 13C1065T plasmid p13C1065T-3, complete sequence (149653 bp)
Overview 1 RT 1: 24182-29474 bp Neighborhood of RT #1 [24182, 29479] PRK11114 RVT-GII GIIM PRK11097 Feature: gene Location: 24182-26332 bp Ori: AUY94019.1 Feature: domain Description: PRK11114 Location: 24242-26315 bp Feature: domain Description: PRK1 1 1 1 4 Location: 24242-2631 5 bp Feature: gene Location: 26672-26851 bp Feature: gene Location: 27076-28422 bp Ori: AUY94020.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27364-27982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27364-27982 bp Feature: domain Description: GIIM Note: maturase Location: 28030-28261 bp Feature: domain Description: GIIM Note: maturase Location: 28030-28261 bp Feature: gene Location: 28588-28994 bp Feature: gene Location: 29333-29479 bp Ori: AUY94129.1 Feature: domain Description: PRK11097 Location: 29345-29474 bp Feature: domain Description: PRK1 1 097 Location: 29345-29474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11114 (cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB), RVT-GII, GIIM (pfam08388), PRK11097 (cellulase)

Seq: CP019259.1 Escherichia coli strain 13C1065T chromosome, complete genome (4658762 bp)
Overview 1 RT 1: 2338455-2347138 bp Neighborhood of RT #1 [2338455, 2347138] DUF4011 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 PHA02517 RVT-GII GIIM Feature: gene Location: 2338455-2344190 bp Ori: AUY91276.1 Feature: domain Description: DUF4011 Location: 2338545-2339379 bp Feature: domain Description: DUF4011 Location: 2 338545-2 339379 bp Feature: domain Description: DEXXQc_SF1 Location: 2339736-2342838 bp Feature: domain Description: DEXXQc_SF1 Location: 2 339736-2 342 838 bp Feature: domain Description: SF1_C_Upf1 Location: 2342847-2343375 bp Feature: domain Description: SF1_C_Upf1 Location: 2 342 847-2 343375 bp Feature: domain Description: MTES_1575 Location: 2343504-2343795 bp Feature: domain Description: MTES_1575 Location: 2 343504-2 343795 bp Feature: gene Location: 2344411-2344869 bp Feature: domain Description: PHA02517 Location: 2344414-2344861 bp Feature: domain Description: PHA02 517 Location: 2 344414-2 344861 bp Feature: gene Location: 2344950-2346473 bp Ori: AUY91277.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2345223-2345955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3452 2 3-2 345955 bp Feature: domain Description: GIIM Note: maturase Location: 2346030-2346228 bp Feature: domain Description: GIIM Note: maturase Location: 2 346030-2 3462 2 8 bp Feature: gene Location: 2346544-2346852 bp Feature: gene Location: 2346767-2347138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), SF1_C_Upf1 (cd18808), MTES_1575 (pfam18741), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)