myRT

myRT report for GCA_002953115.1_ASM295311v1

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Seq: CP026332.1 Pseudomonas sp. XWY-1 chromosome, complete genome (5902716 bp)
Overview 1 RT 1: 2345232-2352024 bp Neighborhood of RT #1 [2345232, 2352032] CytC galU RVT-GII GIIM PRK06116 PBP2_phosphate_like_1 OmpA_C-like Feature: gene Location: 2345232-2346146 bp Ori: AUZ58748.1 Feature: domain Description: CytC Location: 2345295-2346132 bp Feature: domain Description: CytC Location: 2345295-23461 32 bp Feature: gene Location: 2346383-2347222 bp Ori: AUZ58749.1 Feature: domain Description: galU Location: 2346392-2347175 bp Feature: domain Description: galU Location: 2346392-23471 75 bp Feature: gene Location: 2347597-2349117 bp Ori: AUZ58750.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2348053-2348668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2348053-2348668 bp Feature: domain Description: GIIM Note: maturase Location: 2348725-2348950 bp Feature: domain Description: GIIM Note: maturase Location: 2348725-2348950 bp Feature: gene Location: 2349239-2350594 bp Ori: AUZ58751.1 Feature: domain Description: PRK06116 Location: 2349242-2350580 bp Feature: domain Description: PRK061 1 6 Location: 2349242-2350580 bp Feature: gene Location: 2350725-2352032 bp Ori: AUZ58752.1 Feature: domain Description: PBP2_phosphate_like_1 Location: 2350794-2351616 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 2350794-2351 61 6 bp Feature: domain Description: OmpA_C-like Location: 2351715-2352024 bp Feature: domain Description: OmpA_C-like Location: 2351 71 5-2352024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CytC (COG3258), galU (TIGR01099), RVT-GII, GIIM (pfam08388), PRK06116 (glutathione reductase; Validated), PBP2_phosphate_like_1 (cd13653), OmpA_C-like (cl30079)

Seq: CP026333.1 Pseudomonas sp. XWY-1 plasmid, complete genome (394537 bp)
Overview 1 RT 1: 202459-205662 bp 2 RT 2: 285300-291651 bp Neighborhood of RT #1 [202459, 205662] RVT-GII GIIM Neighborhood of RT #2 [285300, 291710] COG4584 COG4584 HTH_23 rve RVT-GII GIIM DDE_Tnp_1 COG3547 Feature: gene Location: 202459-202734 bp Feature: gene Location: 202982-203281 bp Feature: gene Location: 203656-205176 bp Ori: AUZ62172.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204112-204727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 04112 -2 0472 7 bp Feature: domain Description: GIIM Note: maturase Location: 204784-205009 bp Feature: domain Description: GIIM Note: maturase Location: 2 04784-2 05009 bp Feature: gene Location: 205432-205662 bp Feature: gene Location: 285300-286814 bp Ori: AUZ62254.1 Feature: domain Description: COG4584 Location: 285435-286191 bp Feature: domain Description: COG4584 Location: 2 85435-2 86191 bp Feature: domain Description: COG4584 Location: 286251-286701 bp Feature: domain Description: COG4584 Location: 2 862 51-2 86701 bp Feature: gene Location: 287197-287925 bp Ori: AUZ62255.1 Feature: domain Description: HTH_23 Location: 287212-287302 bp Feature: domain Description: HTH_2 3 Location: 2 872 12 -2 87302 bp Feature: domain Description: rve Location: 287371-287764 bp Feature: domain Description: rve Location: 2 87371-2 87764 bp Feature: gene Location: 288623-289867 bp Ori: AUZ62256.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288827-289484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8882 7-2 89484 bp Feature: domain Description: GIIM Note: maturase Location: 289562-289784 bp Feature: domain Description: GIIM Note: maturase Location: 2 89562 -2 89784 bp Feature: gene Location: 289878-290408 bp Ori: AUZ62257.1 Feature: domain Description: DDE_Tnp_1 Location: 289944-290361 bp Feature: domain Description: DDE_Tnp_1 Location: 2 89944-2 90361 bp Feature: gene Location: 290685-291710 bp Ori: AUZ62258.1 Feature: domain Description: COG3547 Location: 290700-291651 bp Feature: domain Description: COG3547 Location: 2 90700-2 91651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG4584 (Transposase ), HTH_23 (pfam13384), rve (pfam00665), DDE_Tnp_1 (pfam01609), COG3547 (Transposase )