myRT

myRT report for GCA_002953215.1_ASM295321v1

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Seq: CP026378.1 Mixta calida strain DSM 22759 chromosome, complete genome (4308453 bp)
Overview 1 RT 1: 167198-171840 bp 2 RT 2: 2558897-2562005 bp Neighborhood of RT #1 [167198, 171842] Psu Ogr_Delta RVT-UG17 SLATT_5 PRK09692 Neighborhood of RT #2 [2558897, 2562016] tail_comp_S RVT-Retrons CSP_CDS phage_P2_V Feature: gene Location: 167198-167707 bp Ori: AUY23586.1 Feature: domain Description: Psu Location: 167222-167678 bp Feature: domain Description: Psu Location: 1 67222-1 67678 bp Feature: gene Location: 167759-168033 bp Feature: domain Description: Ogr_Delta Location: 167771-167903 bp Feature: domain Description: Ogr_Delta Location: 1 67771 -1 67903 bp Feature: gene Location: 168403-169812 bp Ori: AUY23587.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 168640-169252 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 68640-1 69252 bp Feature: gene Location: 170003-170644 bp Ori: AUY23588.1 Feature: domain Description: SLATT_5 Location: 170006-170612 bp Feature: domain Description: SLATT_5 Location: 1 70006-1 7061 2 bp Feature: gene Location: 170694-171842 bp Feature: domain Description: PRK09692 Location: 170706-171840 bp Feature: domain Description: PRK09692 Location: 1 70706-1 71 840 bp Feature: gene Location: 2558897-2559349 bp Ori: AUY25608.1 Feature: domain Description: tail_comp_S Location: 2558924-2559338 bp Feature: domain Description: tail_comp_S Location: 2558924-2559338 bp Feature: gene Location: 2559678-2559884 bp Feature: gene Location: 2559919-2561100 bp Ori: AUY25610.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2560060-2560627 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2560060-2560627 bp Feature: gene Location: 2561091-2561312 bp Ori: AUY25611.1 Feature: domain Description: CSP_CDS Location: 2561124-2561301 bp Feature: domain Description: CSP_CDS Location: 2561 1 24-2561 301 bp Feature: gene Location: 2561432-2562016 bp Ori: AUY27156.1 Feature: domain Description: phage_P2_V Location: 2561462-2562005 bp Feature: domain Description: phage_P2_V Location: 2561 462-2562005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), Ogr_Delta (pfam04606), RVT-UG17, SLATT_5 (pfam18160), PRK09692 (Integrase; provisional), tail_comp_S (TIGR01635), RVT-Retrons, CSP_CDS (cd04458), phage_P2_V (TIGR01644)