myRT

myRT report for GCA_002953535.1_ASM295353v1

Download annotations/find similar RTs

Seq: CP014040.1 Vibrio alginolyticus strain J207 chromosome 1, complete sequence (3434696 bp)
Overview 1 RT 1: 1218342-1224152 bp 2 RT 2: 1795819-1799071 bp Neighborhood of RT #1 [1218342, 1224152] Hypoth_Ymh AAA_15 AAA_15 RVT-Retrons PRK09726 Neighborhood of RT #2 [1795819, 1799070] Relaxase PHA02517 RVT-GII RAYT Feature: gene Location: 1218342-1219142 bp Ori: AVF65451.1 Feature: domain Description: Hypoth_Ymh Location: 1218762-1219122 bp Feature: domain Description: Hypoth_Ymh Location: 1 21 8762-1 21 91 22 bp Feature: gene Location: 1219290-1221407 bp Ori: AVF65452.1 Feature: domain Description: AAA_15 Location: 1219293-1219710 bp Feature: domain Description: AAA_1 5 Location: 1 21 9293-1 21 971 0 bp Feature: domain Description: AAA_15 Location: 1219845-1220274 bp Feature: domain Description: AAA_1 5 Location: 1 21 9845-1 220274 bp Feature: gene Location: 1221583-1222683 bp Ori: AVF65453.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1221727-1222282 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 221 727-1 222282 bp Feature: gene Location: 1223022-1223279 bp Ori: AVF65454.1 Feature: domain Description: PRK09726 Location: 1223031-1223238 bp Feature: domain Description: PRK09726 Location: 1 223031 -1 223238 bp Feature: gene Location: 1223595-1224152 bp Feature: gene Location: 1795819-1797159 bp Feature: domain Description: Relaxase Location: 1795906-1796569 bp Feature: domain Description: Relaxase Location: 1 795906-1 796569 bp Feature: gene Location: 1797204-1797435 bp Feature: domain Description: PHA02517 Location: 1797207-1797378 bp Feature: domain Description: PHA0251 7 Location: 1 797207-1 797378 bp Feature: gene Location: 1797423-1797587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1797435-1797543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 797435-1 797543 bp Feature: gene Location: 1798318-1798874 bp Feature: gene Location: 1798861-1799070 bp Feature: domain Description: RAYT Location: 1798873-1799071 bp Feature: domain Description: RAYT Location: 1 798873-1 799071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hypoth_Ymh (pfam09509), AAA_15 (pfam13175), RVT-Retrons, PRK09726 (type II toxin-antitoxin system antitoxin HipB), Relaxase (pfam03432), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, RAYT (COG1943)

Seq: CP014041.1 Vibrio alginolyticus strain J207 chromosome 2, complete sequence (1833981 bp)
Overview 1 RT 1: 426757-430883 bp Neighborhood of RT #1 [426757, 430891] RVT-Retrons VOC YkwD Feature: gene Location: 426757-426975 bp Feature: gene Location: 427296-428282 bp Feature: gene Location: 428282-429193 bp Ori: AVF63137.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 428381-428963 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42 8381-42 8963 bp Feature: gene Location: 429768-430187 bp Ori: AVF63138.1 Feature: domain Description: VOC Location: 429786-430140 bp Feature: domain Description: VOC Location: 42 9786-430140 bp Feature: gene Location: 430265-430891 bp Ori: AVF63139.1 Feature: domain Description: YkwD Location: 430430-430883 bp Feature: domain Description: YkwD Location: 430430-430883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, VOC (cl14632), YkwD (COG2340)