myRT

myRT report for GCA_002966495.1_ASM296649v1

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Seq: CP016490.1 Halomonas sp. GFAJ-1 chromosome, complete genome (3650492 bp)
Overview 1 RT 1: 2627182-2634365 bp Neighborhood of RT #1 [2627182, 2634370] YuiF TrmJ RVT_N RVT-GII GIIM HNHc groEL groES Feature: gene Location: 2627182-2628528 bp Ori: AVI63325.1 Feature: domain Description: YuiF Location: 2627185-2628526 bp Feature: domain Description: YuiF Location: 26271 85-2628526 bp Feature: gene Location: 2628648-2629382 bp Ori: AVI63326.1 Feature: domain Description: TrmJ Location: 2628654-2629374 bp Feature: domain Description: TrmJ Location: 2628654-2629374 bp Feature: gene Location: 2629628-2631328 bp Ori: AVI63327.1 Feature: domain Description: RVT_N Location: 2629682-2629922 bp Feature: domain Description: RVT_N Location: 2629682-2629922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2629970-2630615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2629970-263061 5 bp Feature: domain Description: GIIM Note: maturase Location: 2630669-2630900 bp Feature: domain Description: GIIM Note: maturase Location: 2630669-2630900 bp Feature: domain Description: HNHc Note: nucleases Location: 2631116-2631266 bp Feature: domain Description: HNHc Note: nucleases Location: 2631 1 1 6-2631 266 bp Feature: gene Location: 2632364-2634007 bp Ori: AVI63328.1 Feature: domain Description: groEL Location: 2632373-2633990 bp Feature: domain Description: groEL Location: 2632373-2633990 bp Feature: gene Location: 2634077-2634370 bp Ori: AVI63329.1 Gene: groES Feature: domain Description: groES Location: 2634080-2634365 bp Feature: domain Description: groES Location: 2634080-2634365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YuiF (COG2056), TrmJ (COG0565), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852), groES (PRK14533)