myRT

myRT report for GCA_002966515.1_ASM296651v1

Download annotations/find similar RTs

Seq: CP023019.1 Shewanella sp. WE21 chromosome, complete genome (5266746 bp)
Overview 1 RT 1: 5096360-5101853 bp 2 RT 2: 5245194-5251731 bp Neighborhood of RT #1 [5096360, 5101853] TlyC COG3293 COG3293 RVT_N RVT-GII GIIM Neighborhood of RT #2 [5245194, 5251731] NOD_PanD_pyr RVT-UG1 Feature: gene Location: 5096360-5097676 bp Ori: AVI68443.1 Feature: domain Description: TlyC Location: 5096366-5097638 bp Feature: domain Description: TlyC Location: 5096366-5097638 bp Feature: gene Location: 5098034-5098792 bp Ori: AVI68444.1 Feature: domain Description: COG3293 Location: 5098052-5098355 bp Feature: domain Description: COG3293 Location: 5098052-5098355 bp Feature: domain Description: COG3293 Location: 5098400-5098778 bp Feature: domain Description: COG3293 Location: 5098400-5098778 bp Feature: gene Location: 5099508-5100980 bp Ori: AVI68445.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5099556-5099799 bp Feature: domain Description: RVT_N Location: 5099556-5099799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5099844-5100471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5099844-51 00471 bp Feature: domain Description: GIIM Note: maturase Location: 5100528-5100756 bp Feature: domain Description: GIIM Note: maturase Location: 51 00528-51 00756 bp Feature: gene Location: 5100908-5101093 bp Feature: gene Location: 5101339-5101853 bp Feature: gene Location: 5245194-5246843 bp Ori: AVI68566.1 Gene: panP Feature: domain Description: NOD_PanD_pyr Location: 5245215-5246790 bp Feature: domain Description: NOD_PanD_pyr Location: 524521 5-5246790 bp Feature: gene Location: 5246911-5247147 bp Feature: gene Location: 5247471-5249663 bp Ori: AVI68568.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 5248158-5248641 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 52481 58-5248641 bp Feature: gene Location: 5249660-5251291 bp Feature: gene Location: 5251291-5251731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TlyC (COG1253), COG3293 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), NOD_PanD_pyr (TIGR03799), RVT-UG1