myRT

myRT report for GCA_002966875.1_ASM296687v1

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Seq: CP025211.1 Klebsiella pneumoniae strain HZW25 chromosome, complete genome (5198587 bp)
Overview 1 RT 1: 225255-232680 bp 2 RT 2: 2127821-2134267 bp Neighborhood of RT #1 [225255, 232727] RVT-Retrons PLDc_unchar5 PLDc_unchar5 Neighborhood of RT #2 [2127821, 2134371] zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-UG17 SLATT_5 Phage_lambda_P Feature: gene Location: 225255-226159 bp Feature: gene Location: 226512-226937 bp Feature: gene Location: 227084-228247 bp Ori: AVI88403.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227309-227984 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 227309-227984 bp Feature: gene Location: 229948-230319 bp Feature: gene Location: 230907-232727 bp Ori: AVI88405.1 Feature: domain Description: PLDc_unchar5 Location: 231735-232134 bp Feature: domain Description: PLDc_unchar5 Location: 231 735-2321 34 bp Feature: domain Description: PLDc_unchar5 Location: 232320-232680 bp Feature: domain Description: PLDc_unchar5 Location: 232320-232680 bp Feature: gene Location: 2127821-2129041 bp Ori: AVI90067.1 Feature: domain Description: zf-ISL3 Location: 2127953-2128079 bp Feature: domain Description: zf-ISL3 Location: 21 27953-21 28079 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 2128097-2128244 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 21 28097-21 28244 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2128295-2129000 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 21 28295-21 29000 bp Feature: gene Location: 2129368-2131320 bp Feature: gene Location: 2131722-2133092 bp Ori: AVI90069.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2131950-2132556 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 21 31 950-21 32556 bp Feature: gene Location: 2133082-2133620 bp Feature: domain Description: SLATT_5 Location: 2133088-2133244 bp Feature: domain Description: SLATT_5 Location: 21 33088-21 33244 bp Feature: gene Location: 2133907-2134371 bp Ori: AVI90070.1 Feature: domain Description: Phage_lambda_P Location: 2133970-2134267 bp Feature: domain Description: Phage_lambda_P Location: 21 33970-21 34267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PLDc_unchar5 (cd09133), zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT-UG17, SLATT_5 (pfam18160), Phage_lambda_P (pfam06992)

Seq: CP025213.1 Klebsiella pneumoniae strain HZW25 plasmid unnamed2, complete sequence (103957 bp)
Overview 1 RT 1: 80294-83747 bp Neighborhood of RT #1 [80294, 83785] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 80294-80725 bp Ori: AVI93177.1 Feature: domain Description: PRK10276 Location: 80345-80708 bp Feature: domain Description: PRK102 76 Location: 80345-80708 bp Feature: gene Location: 80883-81134 bp Feature: gene Location: 81134-82618 bp Ori: AVI93179.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81536-82226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81536-82 2 2 6 bp Feature: gene Location: 82770-83467 bp Feature: domain Description: Zn_Tnp_IS1 Location: 82776-82878 bp Feature: domain Description: Zn_Tnp_IS1 Location: 82 776-82 878 bp Feature: domain Description: HTH_Tnp_IS1 Location: 82899-83031 bp Feature: domain Description: HTH_Tnp_IS1 Location: 82 899-83031 bp Feature: gene Location: 83477-83785 bp Feature: domain Description: Rep_3 Location: 83483-83747 bp Feature: domain Description: Rep_3 Location: 83483-83747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051)

Seq: CP025212.1 Klebsiella pneumoniae strain HZW25 plasmid unnamed1, complete sequence (145759 bp)
Overview 1 RT 1: 124699-127983 bp Neighborhood of RT #1 [124699, 127983] PRK10276 RVT-GII Feature: gene Location: 124699-125124 bp Ori: AVI93086.1 Feature: domain Description: PRK10276 Location: 124702-125110 bp Feature: domain Description: PRK10276 Location: 124702-125110 bp Feature: gene Location: 125278-125529 bp Feature: gene Location: 125529-127037 bp Ori: AVI93088.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125931-126645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12593 1-126645 bp Feature: gene Location: 127271-127501 bp Feature: gene Location: 127768-127983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII