myRT

myRT report for GCA_002968475.1_ASM296847v1

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Seq: CP027152.1 Klebsiella pneumoniae strain AR_0363 plasmid unnamed1, complete sequence (208849 bp)
Overview 1 RT 1: 45178-50338 bp Neighborhood of RT #1 [45178, 50338] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 45178-46449 bp Ori: AVJ89276.1 Feature: domain Description: umuC Location: 45181-46444 bp Feature: domain Description: umuC Location: 451 81 -46444 bp Feature: gene Location: 46449-46874 bp Ori: AVJ89159.1 Feature: domain Description: PRK10276 Location: 46452-46860 bp Feature: domain Description: PRK1 0276 Location: 46452-46860 bp Feature: gene Location: 47280-48764 bp Ori: AVJ89244.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47682-48372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47682-48372 bp Feature: gene Location: 49749-50174 bp Ori: AVJ89266.1 Feature: domain Description: Antirestrict Location: 49884-50172 bp Feature: domain Description: Antirestrict Location: 49884-501 72 bp Feature: gene Location: 50177-50338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: CP027150.1 Klebsiella pneumoniae strain AR_0363 plasmid unnamed3 (65684 bp)
Overview 1 RT 1: 20606-25385 bp Neighborhood of RT #1 [20606, 25385] umuC PRK10276 RVT-GII DDE_Tnp_IS1 Feature: gene Location: 20606-21877 bp Ori: AVJ89019.1 Feature: domain Description: umuC Location: 20609-21869 bp Feature: domain Description: umuC Location: 2 0609-2 1869 bp Feature: gene Location: 21877-22308 bp Ori: AVJ89020.1 Feature: domain Description: PRK10276 Location: 21928-22291 bp Feature: domain Description: PRK102 76 Location: 2 192 8-2 2 2 91 bp Feature: gene Location: 22717-24201 bp Ori: AVJ89021.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23119-23809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3119-2 3809 bp Feature: gene Location: 24547-25050 bp Ori: AVJ89022.1 Feature: domain Description: DDE_Tnp_IS1 Location: 24658-25048 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2 4658-2 5048 bp Feature: gene Location: 25179-25385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400)

Seq: CP027156.1 Klebsiella pneumoniae strain AR_0363 plasmid unnamed4 (184525 bp)
Overview 1 RT 1: 59312-65555 bp 2 RT 2: 122136-126430 bp Neighborhood of RT #1 [59312, 65555] INT_Cre_C RVT-GII Neighborhood of RT #2 [122136, 126480] umuC PRK10276 RVT-GII InsQ Feature: gene Location: 59312-60070 bp Feature: gene Location: 60925-62061 bp Ori: AVJ89409.1 Feature: domain Description: INT_Cre_C Location: 61348-62002 bp Feature: domain Description: INT_Cre_C Location: 613 48-62002 bp Feature: gene Location: 62147-63631 bp Ori: AVJ89374.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62549-63239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62549-63 23 9 bp Feature: gene Location: 63600-63719 bp Feature: gene Location: 64488-65555 bp Feature: gene Location: 122136-123389 bp Ori: AVJ89402.1 Feature: domain Description: umuC Location: 122139-123381 bp Feature: domain Description: umuC Location: 12213 9-123 3 81 bp Feature: gene Location: 123407-123652 bp Ori: AVJ89433.1 Feature: domain Description: PRK10276 Location: 123410-123638 bp Feature: domain Description: PRK10276 Location: 123 410-123 63 8 bp Feature: gene Location: 123915-125399 bp Ori: AVJ89454.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124317-125007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1243 17-125007 bp Feature: gene Location: 125368-125487 bp Feature: gene Location: 126094-126480 bp Ori: AVJ89456.1 Feature: domain Description: InsQ Location: 126100-126430 bp Feature: domain Description: InsQ Location: 126100-12643 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), InsQ (COG0675)

Seq: CP027146.1 Klebsiella pneumoniae strain AR_0363 chromosome, complete genome (5274107 bp)
Overview 1 RT 1: 182099-187463 bp 2 RT 2: 4029119-4035590 bp 3 RT 3: 5269931-5272789 bp Neighborhood of RT #1 [182099, 187519] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #2 [4029119, 4035604] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [5269931, 5273181] umuC PRK10276 RVT-GII Feature: gene Location: 182099-183364 bp Ori: AVJ85709.1 Feature: domain Description: umuC Location: 182102-183362 bp Feature: domain Description: umuC Location: 182102-183362 bp Feature: gene Location: 183367-183786 bp Ori: AVJ88612.1 Feature: domain Description: PRK10276 Location: 183370-183781 bp Feature: domain Description: PRK10276 Location: 183370-183781 bp Feature: gene Location: 183865-185349 bp Ori: AVJ84768.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184267-184957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184 267-184 957 bp Feature: gene Location: 185967-186209 bp Ori: AVJ88487.1 Feature: domain Description: DinI Location: 186018-186198 bp Feature: domain Description: DinI Location: 186018-186198 bp Feature: gene Location: 186380-187519 bp Ori: AVJ86413.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 186563-187463 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 186563-1874 63 bp Feature: gene Location: 4029119-4030543 bp Ori: AVJ84158.1 Gene: sbcB Feature: domain Description: SbcB Location: 4029125-4030541 bp Feature: domain Description: SbcB Location: 4 029125-4 03054 1 bp Feature: gene Location: 4030724-4031887 bp Ori: AVJ86690.1 Gene: dacD Feature: domain Description: dacD Location: 4030727-4031882 bp Feature: domain Description: dacD Location: 4 030727-4 031882 bp Feature: gene Location: 4032408-4033892 bp Ori: AVJ84648.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4032810-4033500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 032810-4 033500 bp Feature: gene Location: 4033974-4034447 bp Ori: AVJ86874.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 4033977-4034436 bp Feature: domain Description: PRK10016 Location: 4 033977-4 034 4 36 bp Feature: gene Location: 4034546-4035604 bp Ori: AVJ87482.1 Gene: yeeA Feature: domain Description: YccC Location: 4034552-4035590 bp Feature: domain Description: YccC Location: 4 034 552-4 035590 bp Feature: gene Location: 5269931-5271196 bp Ori: AVJ85745.1 Feature: domain Description: umuC Location: 5269934-5271194 bp Feature: domain Description: umuC Location: 5269934 -5271194 bp Feature: gene Location: 5271198-5271617 bp Ori: AVJ84753.1 Feature: domain Description: PRK10276 Location: 5271201-5271612 bp Feature: domain Description: PRK10276 Location: 5271201-5271612 bp Feature: gene Location: 5271697-5273181 bp Ori: AVJ87215.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5272099-5272789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5272099-5272789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)