myRT

myRT report for GCA_002968495.1_ASM296849v1

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Seq: CP027161.1 Klebsiella pneumoniae strain AR_0361 plasmid unnamed1, complete sequence (207543 bp)
Overview 1 RT 1: 26047-31529 bp Neighborhood of RT #1 [26047, 31534] DNA_pol3_theta Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 26047-26301 bp Ori: AVK35000.1 Feature: domain Description: DNA_pol3_theta Location: 26056-26260 bp Feature: domain Description: DNA_pol3_theta Location: 26056-26260 bp Feature: gene Location: 26538-26963 bp Ori: AVK35094.1 Feature: domain Description: Antirestrict Location: 26673-26961 bp Feature: domain Description: Antirestrict Location: 26673-26961 bp Feature: gene Location: 27948-29432 bp Ori: AVK35088.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28350-29040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28350-29040 bp Feature: gene Location: 30018-30263 bp Ori: AVK34968.1 Feature: domain Description: PRK10276 Location: 30021-30249 bp Feature: domain Description: PRK1 0276 Location: 30021 -30249 bp Feature: gene Location: 30263-31534 bp Ori: AVK35046.1 Feature: domain Description: umuC Location: 30266-31529 bp Feature: domain Description: umuC Location: 30266-31 529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_pol3_theta (pfam06440), Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP027160.1 Klebsiella pneumoniae strain AR_0361 chromosome, complete genome (5194420 bp)
Overview 1 RT 1: 813482-819087 bp 2 RT 2: 1156095-1161402 bp 3 RT 3: 2471782-2478265 bp Neighborhood of RT #1 [813482, 819113] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1156095, 1161404] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [2471782, 2478267] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 813482-814045 bp Ori: AVK29890.1 Feature: domain Description: YbjK Location: 813488-814025 bp Feature: domain Description: YbjK Location: 813488-81402 5 bp Feature: gene Location: 814168-815148 bp Ori: AVK33978.1 Feature: domain Description: int Location: 814171-815098 bp Feature: domain Description: int Location: 814171-815098 bp Feature: gene Location: 815639-817123 bp Ori: AVK29971.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 816041-816731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 816041-816731 bp Feature: gene Location: 817222-818166 bp Feature: gene Location: 818178-819113 bp Ori: AVK33737.1 Feature: domain Description: Phage_CI_repr Location: 818262-818445 bp Feature: domain Description: Phage_CI_repr Location: 8182 62 -818445 bp Feature: domain Description: Phage_CI_repr Location: 818574-818766 bp Feature: domain Description: Phage_CI_repr Location: 818574-818766 bp Feature: domain Description: Phage_CI_C Location: 818793-819087 bp Feature: domain Description: Phage_CI_C Location: 818793-819087 bp Feature: gene Location: 1156095-1157123 bp Ori: AVK32664.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1156167-1157070 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1156167-1157070 bp Feature: gene Location: 1157294-1157536 bp Ori: AVK33726.1 Feature: domain Description: DinI Location: 1157345-1157525 bp Feature: domain Description: DinI Location: 1157345-115752 5 bp Feature: gene Location: 1158154-1159638 bp Ori: AVK32221.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1158556-1159246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1158556-11592 46 bp Feature: gene Location: 1159717-1160136 bp Ori: AVK32440.1 Feature: domain Description: PRK10276 Location: 1159720-1160131 bp Feature: domain Description: PRK102 76 Location: 115972 0-1160131 bp Feature: gene Location: 1160157-1161404 bp Ori: AVK31257.1 Feature: domain Description: umuC Location: 1160160-1161402 bp Feature: domain Description: umuC Location: 1160160-1161402 bp Feature: gene Location: 2471782-2472840 bp Ori: AVK31569.1 Gene: yeeA Feature: domain Description: YccC Location: 2471788-2472826 bp Feature: domain Description: YccC Location: 2 471788-2 472 82 6 bp Feature: gene Location: 2472939-2473412 bp Ori: AVK30322.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 2472942-2473401 bp Feature: domain Description: PRK10016 Location: 2 472 942 -2 473401 bp Feature: gene Location: 2473494-2474978 bp Ori: AVK34858.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2473896-2474586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 473896-2 474586 bp Feature: gene Location: 2475499-2476662 bp Ori: AVK33165.1 Gene: dacD Feature: domain Description: dacD Location: 2475502-2476657 bp Feature: domain Description: dacD Location: 2 475502 -2 476657 bp Feature: gene Location: 2476843-2478267 bp Ori: AVK34839.1 Gene: sbcB Feature: domain Description: SbcB Location: 2476849-2478265 bp Feature: domain Description: SbcB Location: 2 476849-2 4782 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289)
PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: CP027162.1 Klebsiella pneumoniae strain AR_0361 plasmid unnamed3 (42420 bp)
Overview 1 RT 1: 11938-16717 bp Neighborhood of RT #1 [11938, 16717] umuC PRK10276 RVT-GII DDE_Tnp_IS1 Feature: gene Location: 11938-13209 bp Ori: AVK35119.1 Feature: domain Description: umuC Location: 11941-13201 bp Feature: domain Description: umuC Location: 11941-13 201 bp Feature: gene Location: 13209-13640 bp Ori: AVK35120.1 Feature: domain Description: PRK10276 Location: 13260-13623 bp Feature: domain Description: PRK10276 Location: 13 260-13 623 bp Feature: gene Location: 14049-15533 bp Ori: AVK35121.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14451-15141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14451-15141 bp Feature: gene Location: 15879-16382 bp Ori: AVK35122.1 Feature: domain Description: DDE_Tnp_IS1 Location: 15990-16380 bp Feature: domain Description: DDE_Tnp_IS1 Location: 15990-163 80 bp Feature: gene Location: 16511-16717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DDE_Tnp_IS1 (pfam03400)