myRT

myRT report for GCA_002968585.1_ASM296858v1

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Seq: CP027171.1 Pseudomonas aeruginosa strain AR_0354 chromosome, complete genome (6747010 bp)
Overview 1 RT 1: 622559-628680 bp 2 RT 2: 3329523-3337429 bp Neighborhood of RT #1 [622559, 628680] KOG0389 SF2_C_SNF RVT_N RVT-GII GIIM HNHc DEXHc_Snf Neighborhood of RT #2 [3329523, 3337431] AdoMet_MTases DEXHc_Snf RVT_N RVT-GII GIIM HNHc KOG0387 SF2_C_SNF umuC Feature: gene Location: 622559-623428 bp Feature: gene Location: 623542-624801 bp Ori: AVK10357.1 Feature: domain Description: KOG0389 Location: 623572-623692 bp Feature: domain Description: KOG0389 Location: 623572-623692 bp Feature: domain Description: SF2_C_SNF Location: 624241-624637 bp Feature: domain Description: SF2_C_SNF Location: 624241 -624637 bp Feature: gene Location: 624869-626440 bp Ori: AVK10926.1 Feature: domain Description: RVT_N Location: 624872-625016 bp Feature: domain Description: RVT_N Location: 624872-62501 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625067-625718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625067-62571 8 bp Feature: domain Description: GIIM Note: maturase Location: 625772-626003 bp Feature: domain Description: GIIM Note: maturase Location: 625772-626003 bp Feature: domain Description: HNHc Note: nucleases Location: 626237-626393 bp Feature: domain Description: HNHc Note: nucleases Location: 626237-626393 bp Feature: gene Location: 627184-628239 bp Ori: AVK10616.1 Feature: domain Description: DEXHc_Snf Location: 627403-627664 bp Feature: domain Description: DEXHc_Snf Location: 627403-627664 bp Feature: gene Location: 628375-628680 bp Feature: gene Location: 3329523-3330968 bp Ori: AVK13059.1 Feature: domain Description: AdoMet_MTases Location: 3329646-3330012 bp Feature: domain Description: AdoMet_MTases Location: 3329646-333001 2 bp Feature: gene Location: 3331073-3332098 bp Ori: AVK13320.1 Feature: domain Description: DEXHc_Snf Location: 3331265-3331511 bp Feature: domain Description: DEXHc_Snf Location: 3331 265-3331 51 1 bp Feature: gene Location: 3332842-3334413 bp Ori: AVK13565.1 Feature: domain Description: RVT_N Location: 3332845-3332989 bp Feature: domain Description: RVT_N Location: 3332845-3332989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3333040-3333691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3333040-3333691 bp Feature: domain Description: GIIM Note: maturase Location: 3333745-3333976 bp Feature: domain Description: GIIM Note: maturase Location: 3333745-3333976 bp Feature: domain Description: HNHc Note: nucleases Location: 3334210-3334366 bp Feature: domain Description: HNHc Note: nucleases Location: 333421 0-3334366 bp Feature: gene Location: 3334481-3335740 bp Ori: AVK11759.1 Feature: domain Description: KOG0387 Location: 3334520-3334646 bp Feature: domain Description: KOG0387 Location: 3334520-3334646 bp Feature: domain Description: SF2_C_SNF Location: 3335195-3335576 bp Feature: domain Description: SF2_C_SNF Location: 33351 95-3335576 bp Feature: gene Location: 3336424-3337431 bp Ori: AVK09715.1 Feature: domain Description: umuC Location: 3336427-3337429 bp Feature: domain Description: umuC Location: 3336427-3337429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0389 (KOG0389, SNF2 family DNA-dependent ATPase ), SF2_C_SNF (cd18793), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DEXHc_Snf (cd17919), AdoMet_MTases (cl17173), KOG0387 (KOG0387, Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain) ), umuC (PRK03609)