myRT

myRT report for GCA_002968755.1_ASM296875v1

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Seq: CP027170.1 Pseudomonas aeruginosa strain AR_0356 plasmid unnamed2, complete sequence (438531 bp)
Overview 1 RT 1: 281235-285139 bp Neighborhood of RT #1 [281235, 285139] RVT-GII GIIM PRK01712 Feature: gene Location: 281235-281510 bp Feature: gene Location: 282227-282343 bp Feature: gene Location: 282547-283968 bp Ori: AVK09368.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282904-283519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282904-28351 9 bp Feature: domain Description: GIIM Note: maturase Location: 283573-283801 bp Feature: domain Description: GIIM Note: maturase Location: 283573-283801 bp Feature: gene Location: 284371-284547 bp Ori: AVK09168.1 Feature: domain Description: PRK01712 Location: 284374-284539 bp Feature: domain Description: PRK01 71 2 Location: 284374-284539 bp Feature: gene Location: 284852-285139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK01712 (carbon storage regulator CsrA)

Seq: CP027169.1 Pseudomonas aeruginosa strain AR_0356 chromosome, complete genome (6586916 bp)
Overview 1 RT 1: 2030252-2037353 bp 2 RT 2: 3698824-3702956 bp 3 RT 3: 6092282-6099182 bp Neighborhood of RT #1 [2030252, 2037367] KatE RVT-GII GIIM Bfr uvrA Neighborhood of RT #2 [3698824, 3702961] RVT-GII GIIM Nudix_Hydrolase_27 DksA Neighborhood of RT #3 [6092282, 6099298] PRK05656 IS5 RVT-GII GIIM IS5 B12-binding Elp3 Feature: gene Location: 2030252-2030464 bp Feature: gene Location: 2030493-2031941 bp Ori: AVK04791.1 Gene: katA Feature: domain Description: KatE Location: 2030502-2031936 bp Feature: domain Description: KatE Location: 2 030502 -2 031936 bp Feature: gene Location: 2032522-2033847 bp Ori: AVK05915.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2032783-2033398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 032 783-2 033398 bp Feature: domain Description: GIIM Note: maturase Location: 2033452-2033680 bp Feature: domain Description: GIIM Note: maturase Location: 2 033452 -2 033680 bp Feature: gene Location: 2033996-2034460 bp Ori: AVK07948.1 Feature: domain Description: Bfr Location: 2033999-2034458 bp Feature: domain Description: Bfr Location: 2 033999-2 034458 bp Feature: gene Location: 2034530-2037367 bp Ori: AVK07941.1 Gene: uvrA Feature: domain Description: uvrA Location: 2034536-2037353 bp Feature: domain Description: uvrA Location: 2 034536-2 037353 bp Feature: gene Location: 3698824-3698982 bp Feature: gene Location: 3699612-3699929 bp Feature: gene Location: 3700575-3701900 bp Ori: AVK07992.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3700836-3701451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3700836-3701451 bp Feature: domain Description: GIIM Note: maturase Location: 3701505-3701733 bp Feature: domain Description: GIIM Note: maturase Location: 3701505-3701733 bp Feature: gene Location: 3702012-3702539 bp Ori: AVK08221.1 Feature: domain Description: Nudix_Hydrolase_27 Location: 3702084-3702465 bp Feature: domain Description: Nudix_Hydrolase_2 7 Location: 3702 084-3702 465 bp Feature: gene Location: 3702611-3702961 bp Ori: AVK04319.1 Feature: domain Description: DksA Location: 3702629-3702956 bp Feature: domain Description: DksA Location: 3702 62 9-3702 956 bp Feature: gene Location: 6092282-6093463 bp Ori: AVK08200.1 Feature: domain Description: PRK05656 Location: 6092285-6093458 bp Feature: domain Description: PRK05656 Location: 6092 2 85-6093458 bp Feature: gene Location: 6095067-6095525 bp Ori: AVK06185.1 Feature: domain Description: IS5 Location: 6095070-6095493 bp Feature: domain Description: IS5 Location: 6095070-6095493 bp Feature: gene Location: 6095597-6096856 bp Ori: AVK08907.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6095801-6096458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6095801-6096458 bp Feature: domain Description: GIIM Note: maturase Location: 6096536-6096758 bp Feature: domain Description: GIIM Note: maturase Location: 6096536-6096758 bp Feature: gene Location: 6097358-6097888 bp Ori: AVK06118.1 Feature: domain Description: IS5 Location: 6097538-6097862 bp Feature: domain Description: IS5 Location: 6097538-6097862 bp Feature: gene Location: 6098072-6099298 bp Ori: AVK04490.1 Feature: domain Description: B12-binding Location: 6098135-6098477 bp Feature: domain Description: B12 -binding Location: 6098135-6098477 bp Feature: domain Description: Elp3 Location: 6098615-6099182 bp Feature: domain Description: Elp3 Location: 6098615-6099182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KatE (COG0753), RVT-GII, GIIM (pfam08388), Bfr (COG2193), uvrA (PRK00349), Nudix_Hydrolase_27 (cd04686), DksA (COG1734), PRK05656 (acetyl-CoA C-acetyltransferase), IS5 (COG3039), B12-binding (pfam02310)
Elp3 (smart00729)