myRT

myRT report for GCA_002970375.3_ASM297037v3

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Seq: CP034040.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0298 plasmid p1, complete sequence (213351 bp)
Overview 1 RT 1: 31467-35837 bp 2 RT 2: 123443-127372 bp Neighborhood of RT #1 [31467, 35845] InsQ RVT-GII PRK10276 umuC Neighborhood of RT #2 [123443, 127372] PRK10276 RVT-GII INT_Cre_C Feature: gene Location: 31467-31934 bp Feature: domain Description: InsQ Location: 31473-31845 bp Feature: domain Description: InsQ Location: 31 473-31 845 bp Feature: gene Location: 32331-32582 bp Feature: gene Location: 32582-34066 bp Ori: AZJ02091.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32984-33674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32984-33674 bp Feature: gene Location: 34152-34574 bp Ori: AZJ02092.1 Feature: domain Description: PRK10276 Location: 34158-34560 bp Feature: domain Description: PRK1 0276 Location: 341 58-34560 bp Feature: gene Location: 34574-35845 bp Ori: AZJ02093.1 Gene: umuC Feature: domain Description: umuC Location: 34577-35837 bp Feature: domain Description: umuC Location: 34577-35837 bp Feature: gene Location: 123443-123874 bp Ori: AZJ02181.1 Feature: domain Description: PRK10276 Location: 123494-123857 bp Feature: domain Description: PRK1 0276 Location: 1 23494-1 23857 bp Feature: gene Location: 124032-124283 bp Feature: gene Location: 124283-125767 bp Ori: AZJ02183.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124685-125375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 24685-1 25375 bp Feature: gene Location: 125853-126989 bp Ori: AZJ02184.1 Feature: domain Description: INT_Cre_C Location: 126276-126930 bp Feature: domain Description: INT_Cre_C Location: 1 26276-1 26930 bp Feature: gene Location: 127055-127372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), INT_Cre_C (cd00799)

Seq: CP034039.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0298 chromosome, complete genome (5489245 bp)
Overview 1 RT 1: 1276673-1281349 bp 2 RT 2: 1340027-1343775 bp 3 RT 3: 1371262-1374218 bp 4 RT 4: 1859713-1864585 bp 5 RT 5: 3262845-3265676 bp 6 RT 6: 3604068-3608906 bp 7 RT 7: 4049097-4052007 bp Neighborhood of RT #1 [1276673, 1281381] RVT-GII Phage_GPA DUF3850 Neighborhood of RT #2 [1340027, 1343783] RVT-GII PRK10597 DUF1367 Neighborhood of RT #3 [1371262, 1374415] RVT-GII PRK10276 Neighborhood of RT #4 [1859713, 1864599] dacD RVT-GII PRK10016 YccC Neighborhood of RT #5 [3262845, 3265687] PRK10276 RVT-GII DinI Neighborhood of RT #6 [3604068, 3608956] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Neighborhood of RT #7 [4049097, 4052102] RVT-GII Laminin_G_3 Feature: gene Location: 1276673-1276855 bp Feature: gene Location: 1277011-1277262 bp Feature: gene Location: 1277262-1278746 bp Ori: AZI97994.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1277664-1278354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 77664-12 78354 bp Feature: gene Location: 1278887-1281109 bp Ori: AZI97995.1 Feature: domain Description: Phage_GPA Location: 1279310-1280252 bp Feature: domain Description: Phage_GPA Location: 12 79310-12 802 52 bp Feature: gene Location: 1281100-1281381 bp Ori: AZI97996.1 Feature: domain Description: DUF3850 Location: 1281112-1281349 bp Feature: domain Description: DUF3850 Location: 12 81112 -12 81349 bp Feature: gene Location: 1340027-1340254 bp Feature: gene Location: 1340629-1340844 bp Feature: gene Location: 1340977-1342461 bp Ori: AZI98061.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1341379-1342069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1341379-1342 069 bp Feature: gene Location: 1342540-1342773 bp Ori: AZI98062.1 Feature: domain Description: PRK10597 Location: 1342543-1342768 bp Feature: domain Description: PRK10597 Location: 1342 543-1342 768 bp Feature: gene Location: 1343184-1343783 bp Ori: AZI98063.1 Feature: domain Description: DUF1367 Location: 1343190-1343775 bp Feature: domain Description: DUF1367 Location: 1343190-1343775 bp Feature: gene Location: 1371262-1371591 bp Feature: gene Location: 1372045-1372296 bp Feature: gene Location: 1372296-1373780 bp Ori: AZI98100.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372698-1373388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372 698-1373388 bp Feature: gene Location: 1373854-1374093 bp Feature: gene Location: 1374050-1374415 bp Ori: AZI98102.1 Feature: domain Description: PRK10276 Location: 1374095-1374218 bp Feature: domain Description: PRK102 76 Location: 1374095-13742 18 bp Feature: gene Location: 1859713-1860882 bp Ori: AZI98505.1 Gene: dacD Feature: domain Description: dacD Location: 1859722-1860877 bp Feature: domain Description: dacD Location: 185972 2 -1860877 bp Feature: gene Location: 1861152-1861403 bp Feature: gene Location: 1861403-1862887 bp Ori: AZI98507.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1861805-1862495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1861805-1862 495 bp Feature: gene Location: 1862969-1863442 bp Ori: AZI98508.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1862972-1863431 bp Feature: domain Description: PRK10016 Location: 1862 972 -1863431 bp Feature: gene Location: 1863541-1864599 bp Ori: AZI98509.1 Feature: domain Description: YccC Location: 1863547-1864585 bp Feature: domain Description: YccC Location: 1863547-1864585 bp Feature: gene Location: 3262845-3263264 bp Ori: AZI99795.1 Feature: domain Description: PRK10276 Location: 3262848-3263259 bp Feature: domain Description: PRK102 76 Location: 32 62 848-32 632 59 bp Feature: gene Location: 3263242-3263427 bp Feature: gene Location: 3263343-3264827 bp Ori: AZI99797.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3263745-3264435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 63745-32 64435 bp Feature: gene Location: 3264827-3265078 bp Feature: gene Location: 3265445-3265687 bp Ori: AZI99799.1 Feature: domain Description: DinI Location: 3265496-3265676 bp Feature: domain Description: DinI Location: 32 65496-32 65676 bp Feature: gene Location: 3604068-3604946 bp Ori: AZJ01968.1 Feature: domain Description: Phage_CI_repr Location: 3604095-3604278 bp Feature: domain Description: Phage_CI_repr Location: 3604095-36042 78 bp Feature: domain Description: Phage_CI_repr Location: 3604407-3604599 bp Feature: domain Description: Phage_CI_repr Location: 3604407-3604599 bp Feature: domain Description: Phage_CI_C Location: 3604626-3604920 bp Feature: domain Description: Phage_CI_C Location: 360462 6-360492 0 bp Feature: gene Location: 3604958-3605902 bp Feature: gene Location: 3606001-3607485 bp Ori: AZJ00115.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3606403-3607093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3606403-3607093 bp Feature: gene Location: 3607485-3607736 bp Feature: gene Location: 3607904-3608956 bp Ori: AZJ00117.1 Feature: domain Description: int Location: 3607907-3608906 bp Feature: domain Description: int Location: 3607907-3608906 bp Feature: gene Location: 4049097-4049336 bp Feature: gene Location: 4049350-4049421 bp Feature: gene Location: 4049414-4050898 bp Ori: AZJ00499.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4049816-4050506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4049816-4050506 bp Feature: gene Location: 4050898-4051149 bp Feature: gene Location: 4051335-4052102 bp Ori: AZJ00501.1 Feature: domain Description: Laminin_G_3 Location: 4051590-4052007 bp Feature: domain Description: Laminin_G_3 Location: 4051590-4052 007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_GPA (pfam05840), DUF3850 (pfam12961), PRK10597 (DNA damage-inducible protein I; Provisional), DUF1367 (pfam07105), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), DinI (pfam06183)
Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601), Laminin_G_3 (pfam13385)

Seq: CP034041.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0298 plasmid p2, complete sequence (65202 bp)
Overview 1 RT 1: 14176-17181 bp Neighborhood of RT #1 [14176, 17204] MazE PRK09812 RVT-GII PRK10276 Feature: gene Location: 14176-14433 bp Ori: AZJ02290.1 Feature: domain Description: MazE Location: 14185-14425 bp Feature: domain Description: MazE Location: 14185-14425 bp Feature: gene Location: 14435-14767 bp Ori: AZJ02291.1 Feature: domain Description: PRK09812 Location: 14441-14762 bp Feature: domain Description: PRK09812 Location: 14441-14762 bp Feature: gene Location: 14884-16368 bp Ori: AZJ02292.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15286-15976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15286-15976 bp Feature: gene Location: 16368-16619 bp Feature: gene Location: 16770-17204 bp Ori: AZJ02294.1 Feature: domain Description: PRK10276 Location: 16818-17181 bp Feature: domain Description: PRK10276 Location: 16818-17181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazE (COG2336), PRK09812 (type II toxin-antitoxin system ChpB family toxin), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)