myRT

myRT report for GCA_002973635.1_ASM297363v1

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Seq: CP027224.1 Lysinibacillus sp. B2A1 chromosome, complete genome (5508835 bp)
Overview 1 RT 1: 941962-953104 bp 2 RT 2: 1361390-1371158 bp 3 RT 3: 2457344-2464316 bp 4 RT 4: 2842186-2848557 bp 5 RT 5: 3073401-3077447 bp Neighborhood of RT #1 [941962, 953124] addB_Gpos addA_Gpos RVT-GII HNHc addA_Gpos YeiB Neighborhood of RT #2 [1361390, 1371169] PRK09194 polC RVT-GII PolC RimP Neighborhood of RT #3 [2457344, 2464318] trpA recJ RVT-GII recJ ssDNA-exonuc_C PRK02304 Neighborhood of RT #4 [2842186, 2848643] Vsr PRK08115 RVT-GII Intron_maturas2 HNHc PRK08115 AcrR Neighborhood of RT #5 [3073401, 3077470] mscL RVT-GII Intron_maturas2 HNHc Slt35_like YeaQ Feature: gene Location: 941962-945471 bp Ori: AVK82846.1 Gene: addB Feature: domain Description: addB_Gpos Location: 941965-945466 bp Feature: domain Description: addB_Gpos Location: 941 965-945466 bp Feature: gene Location: 945473-946735 bp Feature: domain Description: addA_Gpos Location: 945512-946736 bp Feature: domain Description: addA_Gpos Location: 94551 2-946736 bp Feature: gene Location: 947459-949324 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 947783-948518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 947783-94851 8 bp Feature: domain Description: HNHc Note: nucleases Location: 949073-949211 bp Feature: domain Description: HNHc Note: nucleases Location: 949073-94921 1 bp Feature: gene Location: 949425-951884 bp Gene: addA Feature: domain Description: addA_Gpos Location: 949431-951873 bp Feature: domain Description: addA_Gpos Location: 949431 -951 873 bp Feature: gene Location: 951958-953124 bp Ori: AVK82847.1 Feature: domain Description: YeiB Location: 951970-953104 bp Feature: domain Description: YeiB Location: 951 970-9531 04 bp Feature: gene Location: 1361390-1363096 bp Ori: AVK83202.1 Feature: domain Description: PRK09194 Location: 1361393-1363079 bp Feature: domain Description: PRK091 94 Location: 1 361 393-1 363079 bp Feature: gene Location: 1363303-1366245 bp Ori: AVK83203.1 Feature: domain Description: polC Location: 1363327-1366228 bp Feature: domain Description: polC Location: 1 363327-1 366228 bp Feature: gene Location: 1366954-1368779 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1367260-1367956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 367260-1 367956 bp Feature: gene Location: 1368858-1370290 bp Feature: domain Description: PolC Location: 1368891-1369116 bp Feature: domain Description: PolC Location: 1 368891 -1 3691 1 6 bp Feature: gene Location: 1370693-1371169 bp Ori: AVK83204.1 Feature: domain Description: RimP Location: 1370708-1371158 bp Feature: domain Description: RimP Location: 1 370708-1 371 1 58 bp Feature: gene Location: 2457344-2458135 bp Ori: AVK84163.1 Feature: domain Description: trpA Location: 2457365-2458091 bp Feature: domain Description: trpA Location: 2457365-2458091 bp Feature: gene Location: 2458680-2458970 bp Ori: AVK84164.1 Feature: domain Description: recJ Location: 2458764-2458953 bp Feature: domain Description: recJ Location: 2458764-2458953 bp Feature: gene Location: 2459683-2461565 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2460007-2460181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2460007-24601 81 bp Feature: gene Location: 2461751-2463772 bp Ori: AVK86970.1 Gene: recJ Feature: domain Description: recJ Location: 2461754-2463140 bp Feature: domain Description: recJ Location: 2461 754-24631 40 bp Feature: domain Description: ssDNA-exonuc_C Location: 2463158-2463755 bp Feature: domain Description: ssDNA-exonuc_C Location: 24631 58-2463755 bp Feature: gene Location: 2463806-2464318 bp Ori: AVK84165.1 Feature: domain Description: PRK02304 Location: 2463809-2464316 bp Feature: domain Description: PRK02304 Location: 2463809-246431 6 bp Feature: gene Location: 2842186-2843067 bp Ori: AVK84497.1 Feature: domain Description: Vsr Location: 2842696-2843005 bp Feature: domain Description: Vsr Location: 2842696-2843005 bp Feature: gene Location: 2843274-2843972 bp Ori: AVK84498.1 Feature: domain Description: PRK08115 Location: 2843301-2843955 bp Feature: domain Description: PRK081 1 5 Location: 2843301 -2843955 bp Feature: gene Location: 2844610-2846442 bp Ori: AVK84499.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2844877-2845708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2844877-2845708 bp Feature: domain Description: Intron_maturas2 Location: 2845795-2846059 bp Feature: domain Description: Intron_maturas2 Location: 2845795-2846059 bp Feature: domain Description: HNHc Note: nucleases Location: 2846218-2846416 bp Feature: domain Description: HNHc Note: nucleases Location: 284621 8-284641 6 bp Feature: gene Location: 2846587-2847690 bp Ori: AVK84500.1 Feature: domain Description: PRK08115 Location: 2846590-2847688 bp Feature: domain Description: PRK081 1 5 Location: 2846590-2847688 bp Feature: gene Location: 2848038-2848643 bp Ori: AVK84501.1 Feature: domain Description: AcrR Location: 2848077-2848557 bp Feature: domain Description: AcrR Location: 2848077-2848557 bp Feature: gene Location: 3073401-3073790 bp Ori: AVK84703.1 Gene: mscL Feature: domain Description: mscL Location: 3073404-3073782 bp Feature: domain Description: mscL Location: 3073404-3073782 bp Feature: gene Location: 3074011-3074304 bp Feature: gene Location: 3074900-3076723 bp Ori: AVK84704.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3075164-3075995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30751 64-3075995 bp Feature: domain Description: Intron_maturas2 Location: 3076142-3076370 bp Feature: domain Description: Intron_maturas2 Location: 30761 42-3076370 bp Feature: domain Description: HNHc Note: nucleases Location: 3076550-3076694 bp Feature: domain Description: HNHc Note: nucleases Location: 3076550-3076694 bp Feature: gene Location: 3076827-3077177 bp Feature: domain Description: Slt35_like Location: 3076935-3077109 bp Feature: domain Description: Slt35_like Location: 3076935-30771 09 bp Feature: gene Location: 3077213-3077470 bp Ori: AVK84705.1 Feature: domain Description: YeaQ Location: 3077222-3077447 bp Feature: domain Description: YeaQ Location: 3077222-3077447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT addB_Gpos (TIGR02773), addA_Gpos (TIGR02785), RVT-GII, HNHc (smart00507), YeiB (COG2311), PRK09194 (prolyl-tRNA synthetase; Provisional), polC (TIGR00354), PolC (COG2176), RimP (COG0779), trpA (TIGR00262)
recJ (TIGR00644), ssDNA-exonuc_C (pfam10141), PRK02304 (adenine phosphoribosyltransferase; Provisional), Vsr (pfam03852), PRK08115 (vitamin B12-dependent ribonucleotide reductase), Intron_maturas2 (pfam01348), AcrR (COG1309), mscL (TIGR00220), Slt35_like, YeaQ (COG2261)