myRT

myRT report for GCA_002984395.1_ASM298439v1

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Seq: CP027426.1 Klebsiella oxytoca strain FDAARGOS_335 chromosome, complete genome (5853942 bp)
Overview 1 RT 1: 1253184-1256624 bp 2 RT 2: 5139115-5144198 bp Neighborhood of RT #1 [1253184, 1256624] RVT-Retrons Neighborhood of RT #2 [5139115, 5144239] YccC PRK10016 RVT-GII Caps_assemb_Wzi Feature: gene Location: 1253184-1253411 bp Feature: gene Location: 1253475-1254437 bp Feature: gene Location: 1254503-1255372 bp Ori: AVL84016.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1254548-1255133 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 254548-1 2551 33 bp Feature: gene Location: 1255678-1256202 bp Feature: gene Location: 1256421-1256624 bp Feature: gene Location: 5139115-5140173 bp Ori: AVL84186.1 Feature: domain Description: YccC Location: 5139121-5140159 bp Feature: domain Description: YccC Location: 51 391 21 -51 401 59 bp Feature: gene Location: 5140270-5140743 bp Ori: AVL83388.1 Feature: domain Description: PRK10016 Location: 5140273-5140732 bp Feature: domain Description: PRK1 001 6 Location: 51 40273-51 40732 bp Feature: gene Location: 5140825-5142333 bp Ori: AVL83389.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5141227-5141941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 41 227-51 41 941 bp Feature: gene Location: 5142466-5142711 bp Feature: gene Location: 5142803-5144239 bp Ori: AVL83390.1 Feature: domain Description: Caps_assemb_Wzi Location: 5143073-5144198 bp Feature: domain Description: Caps_assemb_Wzi Location: 51 43073-51 441 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, Caps_assemb_Wzi (pfam14052)

Seq: CP027425.1 Klebsiella oxytoca strain FDAARGOS_335 plasmid unnamed, complete sequence (195881 bp)
Overview 1 RT 1: 56031-59301 bp Neighborhood of RT #1 [56031, 59315] RVT-GII PRK10276 Feature: gene Location: 56031-56246 bp Feature: gene Location: 56513-56743 bp Feature: gene Location: 56977-58485 bp Ori: AVL78737.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57379-58093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57379-58093 bp Feature: gene Location: 58485-58736 bp Feature: gene Location: 58890-59315 bp Ori: AVL78739.1 Feature: domain Description: PRK10276 Location: 58893-59301 bp Feature: domain Description: PRK102 76 Location: 58893-59301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)