myRT

myRT report for GCA_003003595.1_ASM300359v1

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Seq: CP021263.1 Legionella pneumophila subsp. fraseri strain D-3137 chromosome, complete genome (3474810 bp)
Overview 1 RT 1: 805301-809840 bp 2 RT 2: 2142282-2146296 bp 3 RT 3: 2289359-2294175 bp Neighborhood of RT #1 [805301, 809878] HTH_23 HTH_33 InsE RVT-GII RVT_1 GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 PHA02517 Neighborhood of RT #2 [2142282, 2146296] RVT-UG18 Neighborhood of RT #3 [2289359, 2294306] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 805301-805861 bp Feature: domain Description: HTH_23 Location: 805388-805511 bp Feature: domain Description: HTH_23 Location: 805388-80551 1 bp Feature: domain Description: HTH_33 Location: 805604-805769 bp Feature: domain Description: HTH_33 Location: 805604-805769 bp Feature: gene Location: 805951-806244 bp Feature: domain Description: InsE Location: 805960-806224 bp Feature: domain Description: InsE Location: 805960-806224 bp Feature: gene Location: 806781-807935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806985-807183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806985-8071 83 bp Feature: domain Description: RVT_1 Location: 807237-807555 bp Feature: domain Description: RVT_1 Location: 807237-807555 bp Feature: domain Description: GIIM Note: maturase Location: 807633-807852 bp Feature: domain Description: GIIM Note: maturase Location: 807633-807852 bp Feature: gene Location: 807995-809446 bp Feature: domain Description: Tnp_DNA_bind Location: 808034-808202 bp Feature: domain Description: Tnp_DNA_bind Location: 808034-808202 bp Feature: domain Description: DDE_Tnp_1 Location: 808859-809153 bp Feature: domain Description: DDE_Tnp_1 Location: 808859-8091 53 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 809159-809438 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 8091 59-809438 bp Feature: gene Location: 809534-809878 bp Feature: domain Description: PHA02517 Location: 809597-809840 bp Feature: domain Description: PHA0251 7 Location: 809597-809840 bp Feature: gene Location: 2142282-2142443 bp Feature: gene Location: 2142611-2143624 bp Feature: gene Location: 2144122-2144487 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2144125-2144485 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 21 441 25-21 44485 bp Feature: gene Location: 2144509-2144811 bp Feature: gene Location: 2144965-2146296 bp Feature: gene Location: 2289359-2289736 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2289386-2289722 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2289386-2289722 bp Feature: gene Location: 2290042-2291493 bp Feature: domain Description: Tnp_DNA_bind Location: 2290081-2290249 bp Feature: domain Description: Tnp_DNA_bind Location: 2290081 -2290249 bp Feature: domain Description: DDE_Tnp_1 Location: 2290906-2291200 bp Feature: domain Description: DDE_Tnp_1 Location: 2290906-2291 200 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2291206-2291485 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2291 206-2291 485 bp Feature: gene Location: 2291564-2293084 bp Feature: domain Description: RVT_N Location: 2291621-2291864 bp Feature: domain Description: RVT_N Location: 2291 621 -2291 864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2291909-2292533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2291 909-2292533 bp Feature: domain Description: GIIM Note: maturase Location: 2292584-2292818 bp Feature: domain Description: GIIM Note: maturase Location: 2292584-229281 8 bp Feature: gene Location: 2293320-2293472 bp Feature: gene Location: 2293932-2294306 bp Feature: domain Description: Tra_M Location: 2293980-2294175 bp Feature: domain Description: Tra_M Location: 2293980-22941 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), HTH_33 (pfam13592), InsE (COG2963), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), PHA02517 (putative transposase OrfB; Reviewed)
RVT-UG18, NTP-PPase_MazG_Cterm (cd11529), RVT_N (pfam13655), Tra_M (pfam05261)