myRT

myRT report for GCA_003003675.1_ASM300367v1

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Seq: CP021264.1 Legionella pneumophila subsp. fraseri strain D-5387 chromosome, complete genome (3471959 bp)
Overview 1 RT 1: 803653-807993 bp 2 RT 2: 2137353-2141367 bp 3 RT 3: 2284430-2289246 bp Neighborhood of RT #1 [803653, 808046] HTH_23 HTH_33 InsE RVT-GII RVT_1 GIIM PHA02517 COG3547 Neighborhood of RT #2 [2137353, 2141367] RVT-UG18 Neighborhood of RT #3 [2284430, 2289377] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 803653-804213 bp Feature: domain Description: HTH_23 Location: 803740-803863 bp Feature: domain Description: HTH_23 Location: 803740-803863 bp Feature: domain Description: HTH_33 Location: 803956-804121 bp Feature: domain Description: HTH_33 Location: 803956-8041 21 bp Feature: gene Location: 804303-804596 bp Feature: domain Description: InsE Location: 804312-804576 bp Feature: domain Description: InsE Location: 80431 2-804576 bp Feature: gene Location: 805133-806287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805337-805535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805337-805535 bp Feature: domain Description: RVT_1 Location: 805589-805907 bp Feature: domain Description: RVT_1 Location: 805589-805907 bp Feature: domain Description: GIIM Note: maturase Location: 805985-806204 bp Feature: domain Description: GIIM Note: maturase Location: 805985-806204 bp Feature: gene Location: 806393-806650 bp Feature: domain Description: PHA02517 Location: 806396-806612 bp Feature: domain Description: PHA0251 7 Location: 806396-80661 2 bp Feature: gene Location: 807009-808046 bp Feature: domain Description: COG3547 Location: 807027-807993 bp Feature: domain Description: COG3547 Location: 807027-807993 bp Feature: gene Location: 2137353-2137514 bp Feature: gene Location: 2137682-2138695 bp Feature: gene Location: 2139193-2139558 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2139196-2139556 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 21 391 96-21 39556 bp Feature: gene Location: 2139580-2139882 bp Feature: gene Location: 2140036-2141367 bp Feature: gene Location: 2284430-2284807 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2284457-2284793 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2284457-2284793 bp Feature: gene Location: 2285113-2286564 bp Feature: domain Description: Tnp_DNA_bind Location: 2285152-2285320 bp Feature: domain Description: Tnp_DNA_bind Location: 22851 52-2285320 bp Feature: domain Description: DDE_Tnp_1 Location: 2285977-2286271 bp Feature: domain Description: DDE_Tnp_1 Location: 2285977-2286271 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2286277-2286556 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2286277-2286556 bp Feature: gene Location: 2286635-2288155 bp Feature: domain Description: RVT_N Location: 2286692-2286935 bp Feature: domain Description: RVT_N Location: 2286692-2286935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2286980-2287604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2286980-2287604 bp Feature: domain Description: GIIM Note: maturase Location: 2287655-2287889 bp Feature: domain Description: GIIM Note: maturase Location: 2287655-2287889 bp Feature: gene Location: 2288391-2288543 bp Feature: gene Location: 2289003-2289377 bp Feature: domain Description: Tra_M Location: 2289051-2289246 bp Feature: domain Description: Tra_M Location: 2289051 -2289246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), HTH_33 (pfam13592), InsE (COG2963), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase ), RVT-UG18, NTP-PPase_MazG_Cterm (cd11529)
Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), RVT_N (pfam13655), Tra_M (pfam05261)