myRT

myRT report for GCA_003003755.1_ASM300375v1

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Seq: CP021265.1 Legionella pneumophila subsp. fraseri strain Los Angeles 1 (D-7696) chromosome, complete genome (3555279 bp)
Overview 1 RT 1: 809526-814069 bp 2 RT 2: 1271568-1276026 bp 3 RT 3: 2165006-2169105 bp Neighborhood of RT #1 [809526, 814218] HTH_23 HTH_33 InsE RVT-GII RVT_1 GIIM PHA02517 COG4584 COG4584 Neighborhood of RT #2 [1271568, 1276026] Avd_like DUF1566 RVT-DGRs DUF772 Neighborhood of RT #3 [2165006, 2169105] RVT-UG18 Feature: gene Location: 809526-810086 bp Feature: domain Description: HTH_23 Location: 809613-809736 bp Feature: domain Description: HTH_23 Location: 80961 3-809736 bp Feature: domain Description: HTH_33 Location: 809829-809994 bp Feature: domain Description: HTH_33 Location: 809829-809994 bp Feature: gene Location: 810176-810469 bp Feature: domain Description: InsE Location: 810185-810449 bp Feature: domain Description: InsE Location: 81 01 85-81 0449 bp Feature: gene Location: 811006-812160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 811210-811408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 1 21 0-81 1 408 bp Feature: domain Description: RVT_1 Location: 811462-811780 bp Feature: domain Description: RVT_1 Location: 81 1 462-81 1 780 bp Feature: domain Description: GIIM Note: maturase Location: 811858-812077 bp Feature: domain Description: GIIM Note: maturase Location: 81 1 858-81 2077 bp Feature: gene Location: 812266-812505 bp Feature: domain Description: PHA02517 Location: 812269-812479 bp Feature: domain Description: PHA0251 7 Location: 81 2269-81 2479 bp Feature: gene Location: 812689-814218 bp Feature: domain Description: COG4584 Location: 812776-813577 bp Feature: domain Description: COG4584 Location: 81 2776-81 3577 bp Feature: domain Description: COG4584 Location: 813643-814069 bp Feature: domain Description: COG4584 Location: 81 3643-81 4069 bp Feature: gene Location: 1271568-1271921 bp Feature: domain Description: Avd_like Location: 1271595-1271901 bp Feature: domain Description: Avd_like Location: 1 271 595-1 271 901 bp Feature: gene Location: 1271946-1272227 bp Feature: domain Description: DUF1566 Location: 1272006-1272186 bp Feature: domain Description: DUF1 566 Location: 1 272006-1 2721 86 bp Feature: gene Location: 1272260-1273459 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1272479-1273175 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 272479-1 2731 75 bp Feature: gene Location: 1273478-1274938 bp Feature: domain Description: DUF772 Location: 1273661-1273853 bp Feature: domain Description: DUF772 Location: 1 273661 -1 273853 bp Feature: gene Location: 1275019-1276026 bp Feature: gene Location: 2165006-2165149 bp Feature: gene Location: 2165420-2166433 bp Feature: gene Location: 2166931-2167296 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2166934-2167294 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 21 66934-21 67294 bp Feature: gene Location: 2167318-2167620 bp Feature: gene Location: 2167774-2169105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), HTH_33 (pfam13592), InsE (COG2963), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG4584 (Transposase ), Avd_like (cd16376), DUF1566 (pfam07603)
RVT-DGRs, DUF772 (pfam05598), RVT-UG18