myRT

myRT report for GCA_003004255.1_ASM300425v1

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Seq: CP021279.1 Legionella pneumophila subsp. fraseri strain F-4198 chromosome, complete genome (3461540 bp)
Overview 1 RT 1: 805301-809641 bp 2 RT 2: 2127099-2131113 bp 3 RT 3: 2274176-2278992 bp Neighborhood of RT #1 [805301, 809694] HTH_23 HTH_33 InsE RVT-GII RVT_1 GIIM PHA02517 COG3547 Neighborhood of RT #2 [2127099, 2131113] RVT-UG18 Neighborhood of RT #3 [2274176, 2279123] NTP-PPase_MazG_Cterm Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT_N RVT-GII GIIM Tra_M Feature: gene Location: 805301-805861 bp Feature: domain Description: HTH_23 Location: 805388-805511 bp Feature: domain Description: HTH_23 Location: 805388-80551 1 bp Feature: domain Description: HTH_33 Location: 805604-805769 bp Feature: domain Description: HTH_33 Location: 805604-805769 bp Feature: gene Location: 805951-806244 bp Feature: domain Description: InsE Location: 805960-806224 bp Feature: domain Description: InsE Location: 805960-806224 bp Feature: gene Location: 806781-807935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806985-807183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806985-8071 83 bp Feature: domain Description: RVT_1 Location: 807237-807555 bp Feature: domain Description: RVT_1 Location: 807237-807555 bp Feature: domain Description: GIIM Note: maturase Location: 807633-807852 bp Feature: domain Description: GIIM Note: maturase Location: 807633-807852 bp Feature: gene Location: 808041-808298 bp Feature: domain Description: PHA02517 Location: 808044-808260 bp Feature: domain Description: PHA0251 7 Location: 808044-808260 bp Feature: gene Location: 808657-809694 bp Feature: domain Description: COG3547 Location: 808675-809641 bp Feature: domain Description: COG3547 Location: 808675-809641 bp Feature: gene Location: 2127099-2127260 bp Feature: gene Location: 2127428-2128441 bp Feature: gene Location: 2128939-2129304 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2128942-2129302 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 21 28942-21 29302 bp Feature: gene Location: 2129326-2129628 bp Feature: gene Location: 2129782-2131113 bp Feature: gene Location: 2274176-2274553 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2274203-2274539 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 2274203-2274539 bp Feature: gene Location: 2274859-2276310 bp Feature: domain Description: Tnp_DNA_bind Location: 2274898-2275066 bp Feature: domain Description: Tnp_DNA_bind Location: 2274898-2275066 bp Feature: domain Description: DDE_Tnp_1 Location: 2275723-2276017 bp Feature: domain Description: DDE_Tnp_1 Location: 2275723-227601 7 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2276023-2276302 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2276023-2276302 bp Feature: gene Location: 2276381-2277901 bp Feature: domain Description: RVT_N Location: 2276438-2276681 bp Feature: domain Description: RVT_N Location: 2276438-2276681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2276726-2277350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2276726-2277350 bp Feature: domain Description: GIIM Note: maturase Location: 2277401-2277635 bp Feature: domain Description: GIIM Note: maturase Location: 2277401 -2277635 bp Feature: gene Location: 2278137-2278289 bp Feature: gene Location: 2278749-2279123 bp Feature: domain Description: Tra_M Location: 2278797-2278992 bp Feature: domain Description: Tra_M Location: 2278797-2278992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), HTH_33 (pfam13592), InsE (COG2963), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase ), RVT-UG18, NTP-PPase_MazG_Cterm (cd11529)
Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), RVT_N (pfam13655), Tra_M (pfam05261)