myRT

myRT report for GCA_003012915.1_ASM301291v1

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Seq: CP027770.1 Staphylococcus felis strain ATCC 49168 chromosome, complete genome (2479423 bp)
Overview 1 RT 1: 75594-83477 bp 2 RT 2: 119974-123516 bp 3 RT 3: 161868-165410 bp 4 RT 4: 293778-301146 bp 5 RT 5: 551087-556585 bp 6 RT 6: 1025579-1038352 bp 7 RT 7: 1184270-1189895 bp 8 RT 8: 1373869-1379735 bp 9 RT 9: 1573166-1578661 bp 10 RT 10: 2249893-2255796 bp Neighborhood of RT #1 [75594, 83482] Cof ModF RVT-GII GIIM PRK00331 MtlA Neighborhood of RT #2 [119974, 123524] InsE RVT-GII GIIM YloU COG5547 Neighborhood of RT #3 [161868, 165418] InsE RVT-GII GIIM YloU COG5547 Neighborhood of RT #4 [293778, 301154] YkvI MFS_LmrB_MDR_like RVT-GII GIIM FepD Neighborhood of RT #5 [551087, 556585] B B Sbi-IV Sbi-IV YwnB RVT-GII GIIM Hydrolase_3 Neighborhood of RT #6 [1025579, 1038366] CdaR YSIRK_signal Rib Rib He_PIG He_PIG He_PIG He_PIG He_PIG He_PIG Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 LPXTG_anchor RVT-GII GIIM YeiH PRK05463 Neighborhood of RT #7 [1184270, 1189906] RVT-GII GIIM YfcC YhaQ Neighborhood of RT #8 [1373869, 1379746] YuzB IscA RVT-GII GIIM Ndh PepB Neighborhood of RT #9 [1573166, 1578726] DUF4064 PTZ00108 DUF4064 RVT-GII GIIM YktB SuhB Neighborhood of RT #10 [2249893, 2255846] hemE HmoA RVT-GII GIIM EcsB CcmA Feature: gene Location: 75594-76448 bp Ori: AVP35516.1 Feature: domain Description: Cof Location: 75603-76443 bp Feature: domain Description: Cof Location: 75603-76443 bp Feature: gene Location: 76521-77300 bp Ori: AVP35517.1 Feature: domain Description: ModF Location: 76527-77199 bp Feature: domain Description: ModF Location: 76527-771 99 bp Feature: gene Location: 77704-78990 bp Ori: AVP35518.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77920-78535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77920-78535 bp Feature: domain Description: GIIM Note: maturase Location: 78598-78826 bp Feature: domain Description: GIIM Note: maturase Location: 78598-78826 bp Feature: gene Location: 79586-81388 bp Ori: AVP35519.1 Gene: glmS Feature: domain Description: PRK00331 Location: 79589-81386 bp Feature: domain Description: PRK00331 Location: 79589-81 386 bp Feature: gene Location: 81944-83482 bp Ori: AVP35520.1 Feature: domain Description: MtlA Location: 81965-83477 bp Feature: domain Description: MtlA Location: 81 965-83477 bp Feature: gene Location: 119974-120220 bp Ori: AVP35546.1 Feature: domain Description: InsE Location: 119980-120220 bp Feature: domain Description: InsE Location: 1 1 9980-1 20220 bp Feature: gene Location: 120220-121118 bp Feature: gene Location: 121125-122150 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121341-121956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 341 -1 21 956 bp Feature: domain Description: GIIM Note: maturase Location: 122019-122136 bp Feature: domain Description: GIIM Note: maturase Location: 1 2201 9-1 221 36 bp Feature: gene Location: 122734-123222 bp Ori: AVP35547.1 Feature: domain Description: YloU Location: 122818-123196 bp Feature: domain Description: YloU Location: 1 2281 8-1 231 96 bp Feature: gene Location: 123282-123524 bp Ori: AVP35548.1 Feature: domain Description: COG5547 Location: 123348-123516 bp Feature: domain Description: COG5547 Location: 1 23348-1 2351 6 bp Feature: gene Location: 161868-162114 bp Ori: AVP35582.1 Feature: domain Description: InsE Location: 161874-162114 bp Feature: domain Description: InsE Location: 1 61 874-1 621 1 4 bp Feature: gene Location: 162114-163012 bp Feature: gene Location: 163019-164044 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163235-163850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 63235-1 63850 bp Feature: domain Description: GIIM Note: maturase Location: 163913-164030 bp Feature: domain Description: GIIM Note: maturase Location: 1 6391 3-1 64030 bp Feature: gene Location: 164628-165116 bp Ori: AVP35583.1 Feature: domain Description: YloU Location: 164712-165090 bp Feature: domain Description: YloU Location: 1 6471 2-1 65090 bp Feature: gene Location: 165176-165418 bp Ori: AVP35584.1 Feature: domain Description: COG5547 Location: 165242-165410 bp Feature: domain Description: COG5547 Location: 1 65242-1 6541 0 bp Feature: gene Location: 293778-294845 bp Ori: AVP35698.1 Feature: domain Description: YkvI Location: 293793-294831 bp Feature: domain Description: YkvI Location: 293793-294831 bp Feature: gene Location: 295208-296608 bp Ori: AVP37597.1 Feature: domain Description: MFS_LmrB_MDR_like Location: 295229-296570 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 295229-296570 bp Feature: gene Location: 297577-298863 bp Ori: AVP35699.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297793-298408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297793-298408 bp Feature: domain Description: GIIM Note: maturase Location: 298471-298699 bp Feature: domain Description: GIIM Note: maturase Location: 298471 -298699 bp Feature: gene Location: 299457-299957 bp Feature: gene Location: 300138-301154 bp Ori: AVP35701.1 Feature: domain Description: FepD Location: 300171-301146 bp Feature: domain Description: FepD Location: 3001 71 -301 1 46 bp Feature: gene Location: 551087-552619 bp Ori: AVP35918.1 Feature: domain Description: B Location: 551213-551360 bp Feature: domain Description: B Location: 551 21 3-551 360 bp Feature: domain Description: B Location: 551369-551507 bp Feature: domain Description: B Location: 551 369-551 507 bp Feature: domain Description: Sbi-IV Location: 551672-551858 bp Feature: domain Description: Sbi-IV Location: 551 672-551 858 bp Feature: domain Description: Sbi-IV Location: 551888-552074 bp Feature: domain Description: Sbi-IV Location: 551 888-552074 bp Feature: gene Location: 552829-553467 bp Ori: AVP35919.1 Feature: domain Description: YwnB Location: 552832-553453 bp Feature: domain Description: YwnB Location: 552832-553453 bp Feature: gene Location: 553550-554836 bp Ori: AVP35920.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553766-554381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553766-554381 bp Feature: domain Description: GIIM Note: maturase Location: 554444-554672 bp Feature: domain Description: GIIM Note: maturase Location: 554444-554672 bp Feature: gene Location: 555457-556200 bp Ori: AVP35921.1 Feature: domain Description: Hydrolase_3 Location: 555469-556114 bp Feature: domain Description: Hydrolase_3 Location: 555469-5561 1 4 bp Feature: gene Location: 556331-556585 bp Feature: gene Location: 1025579-1026709 bp Ori: AVP36291.1 Feature: domain Description: CdaR Location: 1025585-1026695 bp Feature: domain Description: CdaR Location: 1 025585-1 026695 bp Feature: gene Location: 1027121-1034074 bp Ori: AVP36292.1 Feature: domain Description: YSIRK_signal Location: 1027169-1027277 bp Feature: domain Description: YSIRK_signal Location: 1 0271 69-1 027277 bp Feature: domain Description: Rib Location: 1028057-1028228 bp Feature: domain Description: Rib Location: 1 028057-1 028228 bp Feature: domain Description: Rib Location: 1029701-1029905 bp Feature: domain Description: Rib Location: 1 029701 -1 029905 bp Feature: domain Description: He_PIG Location: 1030028-1030181 bp Feature: domain Description: He_PIG Location: 1 030028-1 0301 81 bp Feature: domain Description: He_PIG Location: 1030454-1030607 bp Feature: domain Description: He_PIG Location: 1 030454-1 030607 bp Feature: domain Description: He_PIG Location: 1030880-1031033 bp Feature: domain Description: He_PIG Location: 1 030880-1 031 033 bp Feature: domain Description: He_PIG Location: 1031306-1031459 bp Feature: domain Description: He_PIG Location: 1 031 306-1 031 459 bp Feature: domain Description: He_PIG Location: 1031732-1031879 bp Feature: domain Description: He_PIG Location: 1 031 732-1 031 879 bp Feature: domain Description: He_PIG Location: 1032158-1032305 bp Feature: domain Description: He_PIG Location: 1 0321 58-1 032305 bp Feature: domain Description: Big_6 Location: 1032479-1032728 bp Feature: domain Description: Big_6 Location: 1 032479-1 032728 bp Feature: domain Description: Big_6 Location: 1032737-1032986 bp Feature: domain Description: Big_6 Location: 1 032737-1 032986 bp Feature: domain Description: Big_6 Location: 1032995-1033244 bp Feature: domain Description: Big_6 Location: 1 032995-1 033244 bp Feature: domain Description: Big_6 Location: 1033253-1033502 bp Feature: domain Description: Big_6 Location: 1 033253-1 033502 bp Feature: domain Description: Big_6 Location: 1033511-1033745 bp Feature: domain Description: Big_6 Location: 1 03351 1 -1 033745 bp Feature: domain Description: Big_6 Location: 1033757-1033946 bp Feature: domain Description: Big_6 Location: 1 033757-1 033946 bp Feature: domain Description: LPXTG_anchor Location: 1033961-1034057 bp Feature: domain Description: LPXTG_anchor Location: 1 033961 -1 034057 bp Feature: gene Location: 1034671-1035957 bp Ori: AVP36293.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034887-1035502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 034887-1 035502 bp Feature: domain Description: GIIM Note: maturase Location: 1035565-1035793 bp Feature: domain Description: GIIM Note: maturase Location: 1 035565-1 035793 bp Feature: gene Location: 1036126-1037118 bp Ori: AVP37628.1 Feature: domain Description: YeiH Location: 1036135-1037101 bp Feature: domain Description: YeiH Location: 1 0361 35-1 0371 01 bp Feature: gene Location: 1037578-1038366 bp Ori: AVP36294.1 Feature: domain Description: PRK05463 Location: 1037602-1038352 bp Feature: domain Description: PRK05463 Location: 1 037602-1 038352 bp Feature: gene Location: 1184270-1184770 bp Feature: gene Location: 1184751-1185179 bp Feature: gene Location: 1185792-1187078 bp Ori: AVP36413.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1186008-1186623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 86008-1 1 86623 bp Feature: domain Description: GIIM Note: maturase Location: 1186686-1186914 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 86686-1 1 8691 4 bp Feature: gene Location: 1187537-1188919 bp Ori: AVP36414.1 Feature: domain Description: YfcC Location: 1187543-1188908 bp Feature: domain Description: YfcC Location: 1 1 87543-1 1 88908 bp Feature: gene Location: 1189007-1189906 bp Ori: AVP36415.1 Feature: domain Description: YhaQ Location: 1189010-1189895 bp Feature: domain Description: YhaQ Location: 1 1 8901 0-1 1 89895 bp Feature: gene Location: 1373869-1374105 bp Ori: AVP36603.1 Feature: domain Description: YuzB Location: 1373872-1374103 bp Feature: domain Description: YuzB Location: 1 373872-1 3741 03 bp Feature: gene Location: 1374118-1374477 bp Ori: AVP36604.1 Feature: domain Description: IscA Location: 1374127-1374442 bp Feature: domain Description: IscA Location: 1 3741 27-1 374442 bp Feature: gene Location: 1375173-1376459 bp Ori: AVP36605.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375389-1376004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 375389-1 376004 bp Feature: domain Description: GIIM Note: maturase Location: 1376067-1376295 bp Feature: domain Description: GIIM Note: maturase Location: 1 376067-1 376295 bp Feature: gene Location: 1376972-1378174 bp Ori: AVP36606.1 Feature: domain Description: Ndh Location: 1376981-1378157 bp Feature: domain Description: Ndh Location: 1 376981 -1 3781 57 bp Feature: gene Location: 1378271-1379746 bp Ori: AVP36607.1 Feature: domain Description: PepB Location: 1378292-1379735 bp Feature: domain Description: PepB Location: 1 378292-1 379735 bp Feature: gene Location: 1573166-1574179 bp Ori: AVP36772.1 Feature: domain Description: DUF4064 Location: 1573208-1573541 bp Feature: domain Description: DUF4064 Location: 1 573208-1 573541 bp Feature: domain Description: PTZ00108 Location: 1573697-1574171 bp Feature: domain Description: PTZ001 08 Location: 1 573697-1 5741 71 bp Feature: gene Location: 1574349-1574993 bp Ori: AVP36773.1 Feature: domain Description: DUF4064 Location: 1574430-1574730 bp Feature: domain Description: DUF4064 Location: 1 574430-1 574730 bp Feature: gene Location: 1575570-1576856 bp Ori: AVP36774.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1575786-1576401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 575786-1 576401 bp Feature: domain Description: GIIM Note: maturase Location: 1576464-1576692 bp Feature: domain Description: GIIM Note: maturase Location: 1 576464-1 576692 bp Feature: gene Location: 1577177-1577788 bp Ori: AVP36775.1 Feature: domain Description: YktB Location: 1577180-1577786 bp Feature: domain Description: YktB Location: 1 5771 80-1 577786 bp Feature: gene Location: 1577905-1578726 bp Ori: AVP36776.1 Feature: domain Description: SuhB Location: 1577935-1578661 bp Feature: domain Description: SuhB Location: 1 577935-1 578661 bp Feature: gene Location: 2249893-2250927 bp Ori: AVP37375.1 Feature: domain Description: hemE Location: 2249908-2250919 bp Feature: domain Description: hemE Location: 2249908-225091 9 bp Feature: gene Location: 2251162-2251689 bp Ori: AVP37376.1 Feature: domain Description: HmoA Location: 2251378-2251597 bp Feature: domain Description: HmoA Location: 2251 378-2251 597 bp Feature: gene Location: 2251895-2253181 bp Ori: AVP37377.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2252111-2252726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22521 1 1 -2252726 bp Feature: domain Description: GIIM Note: maturase Location: 2252789-2253017 bp Feature: domain Description: GIIM Note: maturase Location: 2252789-225301 7 bp Feature: gene Location: 2253901-2255115 bp Ori: AVP37378.1 Feature: domain Description: EcsB Location: 2253916-2255050 bp Feature: domain Description: EcsB Location: 225391 6-2255050 bp Feature: gene Location: 2255112-2255846 bp Ori: AVP37379.1 Feature: domain Description: CcmA Location: 2255118-2255796 bp Feature: domain Description: CcmA Location: 22551 1 8-2255796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cof (COG0561), ModF (COG1119), RVT-GII, GIIM (pfam08388), PRK00331 (isomerizing glutamine--fructose-6-phosphate transaminase), MtlA (COG2213), InsE (COG2963), YloU (COG1302), COG5547 (Uncharacterized membrane protein ), YkvI (COG3949)
MFS_LmrB_MDR_like (cd17503), FepD (COG0609), B (PHA00003), Sbi-IV (pfam11621), YwnB (COG2910), Hydrolase_3 (pfam08282), CdaR (COG3835), YSIRK_signal (TIGR01168), Rib (pfam08428), He_PIG (pfam05345)
Big_6 (pfam17936), LPXTG_anchor (TIGR01167), YeiH (COG2855), PRK05463 (putative hydro-lyase), YfcC (COG1288), YhaQ (COG4152), YuzB (COG4844), IscA (TIGR02011), Ndh (COG1252), PepB (COG0260)
DUF4064 (pfam13273), PTZ00108 (DNA topoisomerase 2-like protein; Provisional), YktB (COG4493), SuhB (COG0483), hemE (TIGR01464), HmoA (COG2329), EcsB (pfam05975), CcmA (COG4133)