myRT

myRT report for GCA_003015145.1_ASM301514v1

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Seq: CP027845.1 Candidatus Phycorickettsia trachydisci isolate CCALA 838 chromosome, complete genome (1472411 bp)
Overview 1 RT 1: 1094098-1098646 bp 2 RT 2: 1276519-1282892 bp 3 RT 3: 1455444-1458916 bp Neighborhood of RT #1 [1094098, 1098646] COG4710 RVT-GII GIIM mpi Neighborhood of RT #2 [1276519, 1282892] DDE_Tnp_Tn3 RVT-GII GIIM AAA-ATPase_like Neighborhood of RT #3 [1455444, 1458916] mpi RVT-GII GIIM Feature: gene Location: 1094098-1094328 bp Ori: AVP87901.1 Feature: domain Description: COG4710 Location: 1094110-1094314 bp Feature: domain Description: COG471 0 Location: 1 0941 1 0-1 09431 4 bp Feature: gene Location: 1094923-1095438 bp Feature: gene Location: 1095748-1096986 bp Ori: AVP87903.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1095946-1096597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 095946-1 096597 bp Feature: domain Description: GIIM Note: maturase Location: 1096678-1096891 bp Feature: domain Description: GIIM Note: maturase Location: 1 096678-1 096891 bp Feature: gene Location: 1097710-1098336 bp Ori: AVP87904.1 Feature: domain Description: mpi Location: 1097725-1098304 bp Feature: domain Description: mpi Location: 1 097725-1 098304 bp Feature: gene Location: 1098338-1098646 bp Feature: gene Location: 1276519-1276947 bp Feature: gene Location: 1277219-1277572 bp Ori: AVP88048.1 Feature: domain Description: DDE_Tnp_Tn3 Location: 1277255-1277510 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1 277255-1 27751 0 bp Feature: gene Location: 1278410-1279648 bp Ori: AVP88049.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1278608-1279259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 278608-1 279259 bp Feature: domain Description: GIIM Note: maturase Location: 1279340-1279553 bp Feature: domain Description: GIIM Note: maturase Location: 1 279340-1 279553 bp Feature: gene Location: 1279756-1281732 bp Ori: AVP88050.1 Feature: domain Description: AAA-ATPase_like Location: 1279864-1280854 bp Feature: domain Description: AAA-ATPase_like Location: 1 279864-1 280854 bp Feature: gene Location: 1282611-1282892 bp Feature: gene Location: 1455444-1455752 bp Feature: gene Location: 1455754-1456380 bp Ori: AVP88207.1 Feature: domain Description: mpi Location: 1455769-1456348 bp Feature: domain Description: mpi Location: 1 455769-1 456348 bp Feature: gene Location: 1457104-1458342 bp Ori: AVP88208.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1457302-1457953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 457302-1 457953 bp Feature: domain Description: GIIM Note: maturase Location: 1458034-1458247 bp Feature: domain Description: GIIM Note: maturase Location: 1 458034-1 458247 bp Feature: gene Location: 1458518-1458769 bp Feature: gene Location: 1458776-1458916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4710 (Predicted DNA-binding protein with an HTH domain ), RVT-GII, GIIM (pfam08388), mpi (PRK13413), DDE_Tnp_Tn3 (pfam01526), AAA-ATPase_like (pfam09820)