myRT

myRT report for GCA_003017195.1_ASM301719v1

Download annotations/find similar RTs

Seq: CP027778.1 Clostridium botulinum strain Mfbjulcb6 chromosome, complete genome (4004635 bp)
Overview 1 RT 1: 833342-840522 bp 2 RT 2: 3849496-3856895 bp 3 RT 3: 3961152-3967317 bp 4 RT 4: 3975910-3982307 bp Neighborhood of RT #1 [833342, 840522] RVT-Retrons Neighborhood of RT #2 [3849496, 3856895] HNH_4 RVT-UG24 Neighborhood of RT #3 [3961152, 3967316] PRK06811 DUF4179 DUF5643 DUF5643 RVT-UNC D_pro_red_PrdB Neighborhood of RT #4 [3975910, 3982330] A_NRPS_TlmIV_like PRK12316 RVT-UNC UDG_F4_TTUDGA_like Feature: gene Location: 833342-836329 bp Feature: gene Location: 836319-838127 bp Feature: gene Location: 838439-839596 bp Ori: AVQ44196.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 838739-839363 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 838739-839363 bp Feature: gene Location: 839929-840057 bp Feature: gene Location: 840436-840522 bp Feature: gene Location: 3849496-3850446 bp Ori: AVQ44256.1 Feature: domain Description: HNH_4 Location: 3850045-3850198 bp Feature: domain Description: HNH_4 Location: 3850045-38501 98 bp Feature: gene Location: 3850802-3851404 bp Feature: gene Location: 3851397-3854654 bp Ori: AVQ44072.1 Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 3851898-3852363 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 3851 898-3852363 bp Feature: gene Location: 3855236-3855589 bp Feature: gene Location: 3855870-3856895 bp Feature: gene Location: 3961152-3961715 bp Ori: AVQ44150.1 Feature: domain Description: PRK06811 Location: 3961155-3961707 bp Feature: domain Description: PRK0681 1 Location: 3961 1 55-3961 707 bp Feature: gene Location: 3961712-3963154 bp Ori: AVQ44151.1 Feature: domain Description: DUF4179 Location: 3961883-3962150 bp Feature: domain Description: DUF41 79 Location: 3961 883-39621 50 bp Feature: domain Description: DUF5643 Location: 3962408-3962789 bp Feature: domain Description: DUF5643 Location: 3962408-3962789 bp Feature: domain Description: DUF5643 Location: 3962858-3963086 bp Feature: domain Description: DUF5643 Location: 3962858-3963086 bp Feature: gene Location: 3963837-3966671 bp Ori: AVQ44152.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 3964434-3965088 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3964434-3965088 bp Feature: gene Location: 3966737-3966988 bp Feature: gene Location: 3967020-3967316 bp Feature: domain Description: D_pro_red_PrdB Location: 3967032-3967317 bp Feature: domain Description: D_pro_red_PrdB Location: 3967032-396731 7 bp Feature: gene Location: 3975910-3976308 bp Feature: domain Description: A_NRPS_TlmIV_like Location: 3975913-3976309 bp Feature: domain Description: A_NRPS_TlmIV_like Location: 397591 3-3976309 bp Feature: gene Location: 3976381-3978399 bp Ori: AVQ44160.1 Feature: domain Description: PRK12316 Location: 3976387-3978385 bp Feature: domain Description: PRK1 231 6 Location: 3976387-3978385 bp Feature: gene Location: 3978712-3980367 bp Ori: AVQ44161.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 3979459-3980089 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3979459-3980089 bp Feature: gene Location: 3980407-3980736 bp Feature: gene Location: 3981734-3982330 bp Ori: AVQ44163.1 Feature: domain Description: UDG_F4_TTUDGA_like Location: 3981809-3982307 bp Feature: domain Description: UDG_F4_TTUDGA_like Location: 3981 809-3982307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HNH_4 (pfam13395), RVT-UG24, PRK06811 (RNA polymerase factor sigma-70; Validated), DUF4179 (pfam13786), DUF5643 (pfam18705), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), D_pro_red_PrdB (TIGR04483), A_NRPS_TlmIV_like (cd12114), PRK12316 (peptide synthase; Provisional)
RVT-CRISPR/RVT-GII/RVT-UG27(RVT-UNC), UDG_F4_TTUDGA_like