myRT

myRT report for GCA_003017225.1_ASM301722v1

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Seq: CP027779.1 Clostridium botulinum strain RF5 chromosome, complete genome (3998747 bp)
Overview 1 RT 1: 2804777-2809911 bp 2 RT 2: 3818893-3827303 bp Neighborhood of RT #1 [2804777, 2809928] NusG_II ApbE RVT-GII HNHc PBP2_phosphate_like_1 Neighborhood of RT #2 [3818893, 3827851] PRK11445 AAA-ATPase_like RVT-Retrons Trypsin_2 HAD_BPGM-like CarboxypepD_reg PHP_HisPPase Feature: gene Location: 2804777-2805169 bp Ori: AVQ50225.1 Feature: domain Description: NusG_II Location: 2804813-2805140 bp Feature: domain Description: NusG_II Location: 280481 3-28051 40 bp Feature: gene Location: 2805285-2806319 bp Ori: AVQ50226.1 Feature: domain Description: ApbE Location: 2805309-2806290 bp Feature: domain Description: ApbE Location: 2805309-2806290 bp Feature: gene Location: 2807074-2808213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2807077-2807488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2807077-2807488 bp Feature: domain Description: HNHc Note: nucleases Location: 2808016-2808142 bp Feature: domain Description: HNHc Note: nucleases Location: 280801 6-28081 42 bp Feature: gene Location: 2808408-2808620 bp Feature: gene Location: 2809017-2809928 bp Ori: AVQ50227.1 Feature: domain Description: PBP2_phosphate_like_1 Location: 2809137-2809911 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 28091 37-280991 1 bp Feature: gene Location: 3818893-3819975 bp Ori: AVQ51104.1 Feature: domain Description: PRK11445 Location: 3818908-3819946 bp Feature: domain Description: PRK1 1 445 Location: 381 8908-381 9946 bp Feature: gene Location: 3820056-3821639 bp Ori: AVQ51105.1 Feature: domain Description: AAA-ATPase_like Location: 3820128-3820824 bp Feature: domain Description: AAA-ATPase_like Location: 38201 28-3820824 bp Feature: gene Location: 3822155-3823921 bp Ori: AVQ51106.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3822320-3822914 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3822320-382291 4 bp Feature: domain Description: Trypsin_2 Location: 3823334-3823790 bp Feature: domain Description: Trypsin_2 Location: 3823334-3823790 bp Feature: gene Location: 3824335-3825006 bp Ori: AVQ51107.1 Feature: domain Description: HAD_BPGM-like Location: 3824350-3824917 bp Feature: domain Description: HAD_BPGM-like Location: 3824350-382491 7 bp Feature: gene Location: 3825293-3827851 bp Ori: AVQ51108.1 Feature: domain Description: CarboxypepD_reg Location: 3826184-3826457 bp Feature: domain Description: CarboxypepD_reg Location: 38261 84-3826457 bp Feature: domain Description: PHP_HisPPase Location: 3826787-3827303 bp Feature: domain Description: PHP_HisPPase Location: 3826787-3827303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NusG_II (pfam07009), ApbE (pfam02424), RVT-GII, HNHc (smart00507), PBP2_phosphate_like_1 (cd13653), PRK11445 (FAD-binding protein), AAA-ATPase_like (pfam09820), RVT-Retrons, Trypsin_2 (pfam13365), HAD_BPGM-like (cd16423)
CarboxypepD_reg (pfam13620), PHP_HisPPase (cd07432)