myRT

myRT report for GCA_003017265.1_ASM301726v1

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Seq: CP027781.1 Clostridium botulinum strain MAP 5 chromosome, complete genome (4002680 bp)
Overview 1 RT 1: 2873742-2878876 bp 2 RT 2: 3805168-3813578 bp Neighborhood of RT #1 [2873742, 2878893] NusG_II ApbE RVT-GII HNHc PBP2_phosphate_like_1 Neighborhood of RT #2 [3805168, 3814126] PRK11445 AAA-ATPase_like RVT-Retrons Trypsin_2 HAD_BPGM-like CarboxypepD_reg PHP_HisPPase Feature: gene Location: 2873742-2874134 bp Ori: AVQ46738.1 Feature: domain Description: NusG_II Location: 2873778-2874105 bp Feature: domain Description: NusG_II Location: 2873778-28741 05 bp Feature: gene Location: 2874250-2875284 bp Ori: AVQ46739.1 Feature: domain Description: ApbE Location: 2874274-2875255 bp Feature: domain Description: ApbE Location: 2874274-2875255 bp Feature: gene Location: 2876039-2877178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2876042-2876453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2876042-2876453 bp Feature: domain Description: HNHc Note: nucleases Location: 2876981-2877107 bp Feature: domain Description: HNHc Note: nucleases Location: 2876981 -28771 07 bp Feature: gene Location: 2877373-2877585 bp Feature: gene Location: 2877982-2878893 bp Ori: AVQ46740.1 Feature: domain Description: PBP2_phosphate_like_1 Location: 2878102-2878876 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 28781 02-2878876 bp Feature: gene Location: 3805168-3806250 bp Ori: AVQ47539.1 Feature: domain Description: PRK11445 Location: 3805183-3806221 bp Feature: domain Description: PRK1 1 445 Location: 38051 83-3806221 bp Feature: gene Location: 3806331-3807914 bp Ori: AVQ47540.1 Feature: domain Description: AAA-ATPase_like Location: 3806403-3807099 bp Feature: domain Description: AAA-ATPase_like Location: 3806403-3807099 bp Feature: gene Location: 3808430-3810196 bp Ori: AVQ47541.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3808595-3809189 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3808595-38091 89 bp Feature: domain Description: Trypsin_2 Location: 3809609-3810065 bp Feature: domain Description: Trypsin_2 Location: 3809609-381 0065 bp Feature: gene Location: 3810610-3811281 bp Ori: AVQ47542.1 Feature: domain Description: HAD_BPGM-like Location: 3810625-3811192 bp Feature: domain Description: HAD_BPGM-like Location: 381 0625-381 1 1 92 bp Feature: gene Location: 3811568-3814126 bp Ori: AVQ47543.1 Feature: domain Description: CarboxypepD_reg Location: 3812459-3812732 bp Feature: domain Description: CarboxypepD_reg Location: 381 2459-381 2732 bp Feature: domain Description: PHP_HisPPase Location: 3813062-3813578 bp Feature: domain Description: PHP_HisPPase Location: 381 3062-381 3578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NusG_II (pfam07009), ApbE (pfam02424), RVT-GII, HNHc (smart00507), PBP2_phosphate_like_1 (cd13653), PRK11445 (FAD-binding protein), AAA-ATPase_like (pfam09820), RVT-Retrons, Trypsin_2 (pfam13365), HAD_BPGM-like (cd16423)
CarboxypepD_reg (pfam13620), PHP_HisPPase (cd07432)