myRT

myRT report for GCA_003018015.1_ASM301801v1

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Seq: CP027378.1 Escherichia coli strain 2013C-4404 plasmid unnamed2 (113102 bp)
Overview 1 RT 1: 2304-6150 bp Neighborhood of RT #1 [2304, 6161] COG4584 COG4584 COG4584 RVT-GII GIIM HNHc DinI Feature: gene Location: 2304-3197 bp Feature: domain Description: COG4584 Location: 2328-2544 bp Feature: domain Description: COG4584 Location: 2328-2544 bp Feature: domain Description: COG4584 Location: 2664-2994 bp Feature: domain Description: COG4584 Location: 2664-2994 bp Feature: gene Location: 3284-3829 bp Feature: domain Description: COG4584 Location: 3365-3788 bp Feature: domain Description: COG4584 Location: 3365-3788 bp Feature: gene Location: 4036-5457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4126-4768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 26-4768 bp Feature: domain Description: GIIM Note: maturase Location: 4819-5053 bp Feature: domain Description: GIIM Note: maturase Location: 481 9-5053 bp Feature: domain Description: HNHc Note: nucleases Location: 5263-5422 bp Feature: domain Description: HNHc Note: nucleases Location: 5263-5422 bp Feature: gene Location: 5587-5820 bp Feature: gene Location: 5880-6161 bp Feature: domain Description: DinI Location: 5970-6150 bp Feature: domain Description: DinI Location: 5970-61 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DinI (pfam06183)