myRT

myRT report for GCA_003018715.1_ASM301871v1

Download annotations/find similar RTs

Seq: CP027331.1 Escherichia coli strain 2013C-3277 chromosome, complete genome (5438694 bp)
Overview 1 RT 1: 1791787-1795885 bp 2 RT 2: 3068452-3072760 bp Neighborhood of RT #1 [1791787, 1795887] DUF905 DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Antirestrict Neighborhood of RT #2 [3068452, 3072760] InsE PHA02517 RVT-GII Intron_maturas2 DUF932 Feature: gene Location: 1791787-1792020 bp Feature: domain Description: DUF905 Location: 1791811-1792009 bp Feature: domain Description: DUF905 Location: 1 791 81 1 -1 792009 bp Feature: gene Location: 1792120-1792518 bp Feature: domain Description: DUF932 Location: 1792228-1792510 bp Feature: domain Description: DUF932 Location: 1 792228-1 79251 0 bp Feature: gene Location: 1793010-1794788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1793271-1794066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 793271 -1 794066 bp Feature: domain Description: Intron_maturas2 Location: 1794192-1794417 bp Feature: domain Description: Intron_maturas2 Location: 1 7941 92-1 79441 7 bp Feature: domain Description: HNHc Note: nucleases Location: 1794612-1794762 bp Feature: domain Description: HNHc Note: nucleases Location: 1 79461 2-1 794762 bp Feature: gene Location: 1794961-1795347 bp Feature: domain Description: DUF932 Location: 1794967-1795312 bp Feature: domain Description: DUF932 Location: 1 794967-1 79531 2 bp Feature: gene Location: 1795402-1795887 bp Feature: domain Description: Antirestrict Location: 1795600-1795885 bp Feature: domain Description: Antirestrict Location: 1 795600-1 795885 bp Feature: gene Location: 3068452-3068754 bp Feature: domain Description: InsE Location: 3068455-3068740 bp Feature: domain Description: InsE Location: 3068455-3068740 bp Feature: gene Location: 3068790-3069608 bp Feature: domain Description: PHA02517 Location: 3068805-3069597 bp Feature: domain Description: PHA0251 7 Location: 3068805-3069597 bp Feature: gene Location: 3069633-3071237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3069894-3070689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3069894-3070689 bp Feature: domain Description: Intron_maturas2 Location: 3070815-3071040 bp Feature: domain Description: Intron_maturas2 Location: 307081 5-3071 040 bp Feature: gene Location: 3071729-3072130 bp Feature: domain Description: DUF932 Location: 3071840-3072122 bp Feature: domain Description: DUF932 Location: 3071 840-30721 22 bp Feature: gene Location: 3072350-3072760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Antirestrict (pfam03230), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)