myRT

myRT report for GCA_003018815.1_ASM301881v1

Download annotations/find similar RTs

Seq: CP027355.1 Escherichia coli strain 2013C-4991 chromosome, complete genome (5367251 bp)
Overview 1 RT 1: 3058560-3062454 bp 2 RT 2: 4586740-4589919 bp Neighborhood of RT #1 [3058560, 3062454] LacI PBP1_GntR RVT-GII GIIM RVT-GII Neighborhood of RT #2 [4586740, 4589984] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 3058560-3059591 bp Feature: domain Description: LacI Location: 3058602-3058737 bp Feature: domain Description: LacI Location: 3058602-3058737 bp Feature: domain Description: PBP1_GntR Location: 3058776-3059586 bp Feature: domain Description: PBP1 _GntR Location: 3058776-3059586 bp Feature: gene Location: 3059625-3059810 bp Feature: gene Location: 3060118-3060969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3060121-3060529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30601 21 -3060529 bp Feature: domain Description: GIIM Note: maturase Location: 3060577-3060802 bp Feature: domain Description: GIIM Note: maturase Location: 3060577-3060802 bp Feature: gene Location: 3060942-3061376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3061134-3061350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3061 1 34-3061 350 bp Feature: gene Location: 3061545-3061742 bp Feature: gene Location: 3062101-3062454 bp Feature: gene Location: 4586740-4586871 bp Feature: gene Location: 4587067-4587513 bp Feature: domain Description: PHA02517 Location: 4587070-4587511 bp Feature: domain Description: PHA0251 7 Location: 4587070-458751 1 bp Feature: gene Location: 4587630-4589153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4587903-4588635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4587903-4588635 bp Feature: domain Description: GIIM Note: maturase Location: 4588710-4588908 bp Feature: domain Description: GIIM Note: maturase Location: 458871 0-4588908 bp Feature: gene Location: 4589107-4589532 bp Feature: gene Location: 4589745-4589984 bp Feature: domain Description: PHA02517 Location: 4589748-4589919 bp Feature: domain Description: PHA0251 7 Location: 4589748-458991 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)