myRT

myRT report for GCA_003019195.1_ASM301919v1

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Seq: CP027640.1 Escherichia coli strain 2014C-4705 chromosome, complete genome (5329029 bp)
Overview 1 RT 1: 3190733-3193467 bp Neighborhood of RT #1 [3190733, 3193496] RVT_N RVT-GII GIIM HNHc DUF1508 DUF1508 antidote_CC2985 Feature: gene Location: 3190733-3190867 bp Feature: gene Location: 3190892-3191137 bp Feature: domain Description: RVT_N Location: 3190946-3191132 bp Feature: domain Description: RVT_N Location: 31 90946-31 91 1 32 bp Feature: gene Location: 3191277-3192593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3191280-3191871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 91 280-31 91 871 bp Feature: domain Description: GIIM Note: maturase Location: 3191922-3192156 bp Feature: domain Description: GIIM Note: maturase Location: 31 91 922-31 921 56 bp Feature: domain Description: HNHc Note: nucleases Location: 3192387-3192537 bp Feature: domain Description: HNHc Note: nucleases Location: 31 92387-31 92537 bp Feature: gene Location: 3192581-3192991 bp Feature: domain Description: DUF1508 Location: 3192692-3192830 bp Feature: domain Description: DUF1 508 Location: 31 92692-31 92830 bp Feature: domain Description: DUF1508 Location: 3192842-3192983 bp Feature: domain Description: DUF1 508 Location: 31 92842-31 92983 bp Feature: gene Location: 3193200-3193496 bp Feature: domain Description: antidote_CC2985 Location: 3193257-3193467 bp Feature: domain Description: antidote_CC2985 Location: 31 93257-31 93467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1508 (pfam07411), antidote_CC2985 (TIGR02606)

Seq: CP027641.1 Escherichia coli strain 2014C-4705 plasmid unnamed, complete sequence (126957 bp)
Overview 1 RT 1: 83607-87411 bp Neighborhood of RT #1 [83607, 87411] StbA RVT_N RVT-GII GIIM HNHc Feature: gene Location: 83607-84569 bp Feature: domain Description: StbA Location: 83610-84558 bp Feature: domain Description: StbA Location: 83610-84558 bp Feature: gene Location: 84670-85008 bp Feature: gene Location: 85238-86938 bp Feature: domain Description: RVT_N Location: 85292-85535 bp Feature: domain Description: RVT_N Location: 852 92 -85535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85580-86216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85580-862 16 bp Feature: domain Description: GIIM Note: maturase Location: 86267-86501 bp Feature: domain Description: GIIM Note: maturase Location: 862 67-86501 bp Feature: domain Description: HNHc Note: nucleases Location: 86732-86882 bp Feature: domain Description: HNHc Note: nucleases Location: 86732 -86882 bp Feature: gene Location: 86975-87103 bp Feature: gene Location: 87154-87411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)